RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MUC3AQ02505 3323 aa20.22■□□□□ 0.83
PTPMT1-201ENST00000326656 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 GOLGA8AA7E2F4 631 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 GOLGA8BA8MQT2 603 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 STXBP3O00186 592 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 SREBF1P36956 1147 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 SLC26A2P50443 739 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 FGD1P98174 961 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 MARCH8Q5T0T0 291 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 FBXO22Q8NEZ5 403 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 GDPD5Q8WTR4 605 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 TCEANC2Q96MN5 208 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 YME1L1Q96TA2 773 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 ANO3Q9BYT9 981 aa20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 COL4A4P53420 1690 aaPredicted RBP20.21■□□□□ 0.83
PTPMT1-201ENST00000326656 CLK2P49760 499 aaKnown RBP20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 MGAT3Q09327 533 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 IER5Q5VY09 327 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 CYP2W1Q8TAV3 490 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 OSBPL7Q9BZF2 842 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 PKD2L1Q9P0L9 805 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 MTUS1Q9ULD2 1270 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 XIRP2A4UGR9 3374 aa20.2■□□□□ 0.82
PTPMT1-201ENST00000326656 ESYT2A0FGR8 921 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 ATG7O95352 703 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 INSRRP14616 1297 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 MARK3P27448 753 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 HSPA4P34932 840 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 STAT5BP51692 787 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 ACTR2P61160 394 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 PTPROQ16827 1216 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 PFKFB3Q16875 520 aaPredicted RBP20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 CCDC12Q8WUD4 166 aaPredicted RBP20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 IL17RAQ96F46 866 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 PCYT2Q99447 389 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 C17orf80Q9BSJ5 609 aa20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 AGO4Q9HCK5 861 aaKnown RBP20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 TCF20Q9UGU0 1960 aaKnown RBP20.19■□□□□ 0.82
PTPMT1-201ENST00000326656 BRWD1Q9NSI6 2320 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 CYP3A4P08684 503 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 ARP10275 920 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 CDC27P30260 824 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 ZNF76P36508 570 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 METAP2P50579 478 aaKnown RBP eCLIP20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 LPIN1Q14693 890 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 EPC2Q52LR7 807 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 FBXO47Q5MNV8 452 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 SKAP1Q86WV1 359 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 NME8Q8N427 588 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 DNAJB3Q8WWF6 145 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 PCDHA2Q9Y5H9 948 aa20.18■□□□□ 0.82
PTPMT1-201ENST00000326656 H3BNC9 293 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 UPP2O95045 317 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 GHRP10912 638 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 SCG2P13521 617 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 ADD1P35611 737 aaKnown RBP20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 KCNQ1P51787 676 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 MRPS6P82932 125 aaKnown RBP20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 TSHZ1Q6ZSZ6 1077 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 MRPL38Q96DV4 380 aaKnown RBP20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 ZMYND12Q9H0C1 365 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 RWDD3Q9Y3V2 267 aa20.17■□□□□ 0.82
PTPMT1-201ENST00000326656 IGKV6D-21A0A0A0MT36 114 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 ENPP3O14638 875 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 PRPF3O43395 683 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 EPB41L2O43491 1005 aaKnown RBP20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 REC8O95072 547 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 RB1P06400 928 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 GNA11P29992 359 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 ITGB3BPQ13352 177 aaPredicted RBP20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 PLCB4Q15147 1175 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 BLOC1S2Q6QNY1 142 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 TMEM192Q8IY95 271 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 CRYGNQ8WXF5 182 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 AGXT2Q9BYV1 514 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 C6orf50Q9HD87 102 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 TRPC6Q9Y210 931 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 CDY2AQ9Y6F7 541 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 NID2Q14112 1375 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 RALGAPA2Q2PPJ7 1873 aa20.16■□□□□ 0.82
PTPMT1-201ENST00000326656 TTC3P53804 2025 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 SMIM35A0A1B0GVV1 85 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 POTEB3A0JP26 581 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 M0QZ92 97 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 PSMA5P28066 241 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 IGBP1P78318 339 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 POTEBQ6S5H4 581 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 Q6ZUG5 572 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 FIBCD1Q8N539 461 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 JAKMIP1Q96N16 626 aaKnown RBP20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 TBC1D22BQ9NU19 505 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 TMEM260Q9NX78 707 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 KDM3AQ9Y4C1 1321 aa20.15■□□□□ 0.82
PTPMT1-201ENST00000326656 C5orf67F2Z3F1 127 aa20.14■□□□□ 0.81
PTPMT1-201ENST00000326656 HBP1O60381 514 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms