RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 FAM160B2Q86V87 743 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 PRPF38AQ8NAV1 312 aaKnown RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 AP1M1Q9BXS5 423 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 KCNK9Q9NPC2 374 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 OPA1O60313 960 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 DKC1O60832 514 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDR1-223ENST00000324771 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 NR1I3Q14994 352 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 CEP55Q53EZ4 464 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 CCDC26Q8TAB7 109 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
DDR1-223ENST00000324771 MTUS1Q9ULD2 1270 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 KIF13AQ9H1H9 1805 aa12.91□□□□□ -0.34
DDR1-223ENST00000324771 A0A1B0GTH6 734 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 FAM76AQ8TAV0 307 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 RASAL2Q9UJF2 1139 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 GYPCP04921 128 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 CD58P19256 250 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 KCTD2Q14681 263 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 SUPT20HL1Q3ZLR7 823 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 ZKSCAN4Q969J2 545 aaPredicted RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 A0A1W2PRG0 241 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 RSPH10B2B2RC85 870 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 RSPH10BP0C881 870 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 MXI1P50539 228 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 BAATQ14032 418 aaPredicted RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 RBM43Q6ZSC3 357 aaKnown RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 IFT20Q8IY31 132 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 GUF1Q8N442 669 aaKnown RBP12.9□□□□□ -0.34
DDR1-223ENST00000324771 RABGGTAQ92696 567 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 LTN1O94822 1766 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 FMN2Q9NZ56 1722 aa12.9□□□□□ -0.34
DDR1-223ENST00000324771 GOLGA6CA6NDK9 693 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 GOLGA6DP0CG33 693 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 PNMA6AP0CW24 399 aaPredicted RBP12.9□□□□□ -0.35
DDR1-223ENST00000324771 PMS1P54277 932 aaKnown RBP12.9□□□□□ -0.35
DDR1-223ENST00000324771 SESTD1Q86VW0 696 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 DNAAF5Q86Y56 855 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 NLRP4Q96MN2 994 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 C1orf112Q9NSG2 853 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 GOLGA6AQ9NYA3 693 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 SMARCAL1Q9NZC9 954 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 PTPN22Q9Y2R2 807 aa12.9□□□□□ -0.35
DDR1-223ENST00000324771 PHLPP2Q6ZVD8 1323 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 ESYT3A0FGR9 886 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 TCP1P17987 556 aaKnown RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 SHMT1P34896 483 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 PRELPP51888 382 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 GTF2A1P52655 376 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 KAZNQ674X7 775 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 RETREG2Q8NC44 543 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 MMS19Q96T76 1030 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 REEP2Q9BRK0 252 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 GOLPH3Q9H4A6 298 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 GABBR1Q9UBS5 961 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 HERC5Q9UII4 1024 aaKnown RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 AGTPBP1Q9UPW5 1226 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 KNDC1Q76NI1 1749 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 PLEKP08567 350 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 MYZAPP0CAP1 466 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 MYBP10242 640 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 BMP6P22004 513 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 NPEPPSP55786 919 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 FAM47CQ5HY64 1035 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 EPB41L5Q9HCM4 733 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 SUGT1Q9Y2Z0 365 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 ZNF185O15231 689 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 GMPSP49915 693 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 PSMD2Q13200 908 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 UAP1Q16222 522 aaPredicted RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
DDR1-223ENST00000324771 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 THNSL1Q8IYQ7 743 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 ABCB6Q9NP58 842 aa12.89□□□□□ -0.35
DDR1-223ENST00000324771 INPP5BP32019 993 aa12.88□□□□□ -0.35
DDR1-223ENST00000324771 USP14P54578 494 aa12.88□□□□□ -0.35
DDR1-223ENST00000324771 SCARA5Q6ZMJ2 495 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms