RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 GNAT1P11488 350 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 SREBF1P36956 1147 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 LPIN1Q14693 890 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 TSGA10IPQ3SY00 556 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 FAM26DQ5JW98 314 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 IL27Q8NEV9 243 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 FBXO22Q8NEZ5 403 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 DNAJB3Q8WWF6 145 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 SEPT1Q8WYJ6 367 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 GLG1Q92896 1179 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 JAKMIP1Q96N16 626 aaKnown RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 UIMC1Q96RL1 719 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 FAM49AQ9H0Q0 323 aaPredicted RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 AGO4Q9HCK5 861 aaKnown RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 SLC9A2Q9UBY0 812 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 SNX14Q9Y5W7 946 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 CDY2AQ9Y6F7 541 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 FNDC1Q4ZHG4 1894 aaPredicted RBP14.12□□□□□ -0.15
TPM3-204ENST00000323144 EVPLQ92817 2033 aa14.12□□□□□ -0.15
TPM3-204ENST00000323144 BDP1A6H8Y1 2624 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 CCNE2O96020 404 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 METAP2P50579 478 aaKnown RBP eCLIP14.11□□□□□ -0.15
TPM3-204ENST00000323144 TTC3P53804 2025 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 ACTR2P61160 394 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 KRT32Q14532 448 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 Q6ZUG5 572 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 BRF1Q92994 677 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 YME1L1Q96TA2 773 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 TRPC6Q9Y210 931 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 INSL6Q9Y581 213 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 V9GY48 417 aaPredicted RBP14.11□□□□□ -0.15
TPM3-204ENST00000323144 NFASCO94856 1347 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 ARID2Q68CP9 1835 aa14.11□□□□□ -0.15
TPM3-204ENST00000323144 SMCO2A6NFE2 343 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 hCG_1984214I3L0E3 225 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 BMP1P13497 986 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 INSRRP14616 1297 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 HSPA4P34932 840 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 ADD1P35611 737 aaKnown RBP14.1□□□□□ -0.15
TPM3-204ENST00000323144 MRPS6P82932 125 aaKnown RBP14.1□□□□□ -0.15
TPM3-204ENST00000323144 TMEM62Q0P6H9 643 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 AP3B2Q13367 1082 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 PLCB4Q15147 1175 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 PFKFB3Q16875 520 aaPredicted RBP14.1□□□□□ -0.15
TPM3-204ENST00000323144 FBXO47Q5MNV8 452 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 JAKMIP3Q5VZ66 844 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 ZNF713Q8N859 430 aaPredicted RBP14.1□□□□□ -0.15
TPM3-204ENST00000323144 RASGRP4Q8TDF6 673 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 KCNB2Q92953 911 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 SMARCAD1Q9H4L7 1026 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 RC3H2Q9HBD1 1191 aaKnown RBP14.1□□□□□ -0.15
TPM3-204ENST00000323144 ADGRA3Q8IWK6 1321 aa14.1□□□□□ -0.15
TPM3-204ENST00000323144 IGLV3-22A0A075B6J6 115 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 FAM86B1E9PN63 330 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 FAM86B2P0C5J1 330 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 LINC00271P0C7V0 271 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 SCG2P13521 617 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 RCAN1P53805 252 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 PKN1Q16512 942 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 EPC2Q52LR7 807 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 CEP55Q53EZ4 464 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 TSHZ1Q6ZSZ6 1077 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 RPAINQ86UA6 219 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 CCDC60Q8IWA6 550 aaPredicted RBP14.09□□□□□ -0.15
TPM3-204ENST00000323144 CRYGNQ8WXF5 182 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 APBB2Q92870 758 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 PHKBQ93100 1093 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 TOP1MTQ969P6 601 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 SDF4Q9BRK5 362 aa14.09□□□□□ -0.15
TPM3-204ENST00000323144 AGO3Q9H9G7 860 aaKnown RBP14.09□□□□□ -0.15
TPM3-204ENST00000323144 CSPG5O95196 566 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 RPS6KB1P23443 525 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 CD52P31358 61 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 FGD1P98174 961 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 BLOC1S2Q6QNY1 142 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 HLA-CQ95604 372 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 UBE2ZQ9H832 354 aaPredicted RBP14.08□□□□□ -0.16
TPM3-204ENST00000323144 NCOA5Q9HCD5 579 aaKnown RBP14.08□□□□□ -0.16
TPM3-204ENST00000323144 RAPGEFL1Q9UHV5 662 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 COG5Q9UP83 839 aa14.08□□□□□ -0.16
TPM3-204ENST00000323144 ESYT2A0FGR8 921 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 MEIS1O00470 390 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
TPM3-204ENST00000323144 HMGB1P09429 215 aaKnown RBP14.07□□□□□ -0.16
TPM3-204ENST00000323144 CTNNB1P35222 781 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 AAK1Q2M2I8 961 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 PLA2G4DQ86XP0 818 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 REXO1Q8N1G1 1221 aaKnown RBP14.07□□□□□ -0.16
TPM3-204ENST00000323144 CCDC136Q96JN2 1154 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 AZI2Q9H6S1 392 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 TRPV2Q9Y5S1 764 aa14.07□□□□□ -0.16
TPM3-204ENST00000323144 IGKV6D-21A0A0A0MT36 114 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 NTRK3Q16288 839 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 NIPA1Q7RTP0 329 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 RSPH3Q86UC2 560 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 TMEM192Q8IY95 271 aa14.06□□□□□ -0.16
TPM3-204ENST00000323144 MRPL38Q96DV4 380 aaKnown RBP14.06□□□□□ -0.16
TPM3-204ENST00000323144 PPP1R16BQ96T49 567 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms