RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 TSHZ1Q6ZSZ6 1077 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 RSPH3Q86UC2 560 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 KLHL23Q8NBE8 558 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 PPP2R3CQ969Q6 453 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 ZBTB10Q96DT7 871 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 TUBE1Q9UJT0 475 aa22.61■■□□□ 1.21
SSNA1-201ENST00000322310 TTC3P53804 2025 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 KIAA1671Q9BY89 1806 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 ST18O60284 1047 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 GLP2RO95838 553 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 COASYQ13057 564 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 MARCH8Q5T0T0 291 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 RTN4RL1Q86UN2 441 aaPredicted RBP22.6■■□□□ 1.21
SSNA1-201ENST00000322310 CRIPAKQ8N1N5 446 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 POF1BQ8WVV4 589 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 SENP7Q9BQF6 1050 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 FAM86C1Q9NVL1 165 aa22.6■■□□□ 1.21
SSNA1-201ENST00000322310 USP15Q9Y4E8 981 aaPredicted RBP22.6■■□□□ 1.21
SSNA1-201ENST00000322310 BAZ2BQ9UIF8 2168 aaKnown RBP22.59■■□□□ 1.21
SSNA1-201ENST00000322310 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
SSNA1-201ENST00000322310 USP17L6PQ6QN14 398 aa22.59■■□□□ 1.21
SSNA1-201ENST00000322310 CMTR2Q8IYT2 770 aaKnown RBP22.59■■□□□ 1.21
SSNA1-201ENST00000322310 FBXL6Q8N531 539 aa22.59■■□□□ 1.21
SSNA1-201ENST00000322310 CFAP54Q96N23 3096 aa22.59■■□□□ 1.21
SSNA1-201ENST00000322310 MBLAC1A4D2B0 266 aaPredicted RBP22.58■■□□□ 1.21
SSNA1-201ENST00000322310 ATP9AO75110 1047 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 GATMP50440 423 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 IGBP1P78318 339 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 MRPS6P82932 125 aaKnown RBP22.58■■□□□ 1.21
SSNA1-201ENST00000322310 RBM10P98175 930 aaKnown RBP22.58■■□□□ 1.21
SSNA1-201ENST00000322310 CBX2Q14781 532 aaPredicted RBP22.58■■□□□ 1.21
SSNA1-201ENST00000322310 NAALADL2Q58DX5 795 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 PCNX4Q63HM2 1172 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 PLEKHM2Q8IWE5 1019 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 RPGRIP1Q96KN7 1286 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 PRRX2Q99811 253 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 FAM49AQ9H0Q0 323 aaPredicted RBP22.58■■□□□ 1.21
SSNA1-201ENST00000322310 IL25Q9H293 177 aa22.58■■□□□ 1.21
SSNA1-201ENST00000322310 KMT2EQ8IZD2 1858 aa22.58■■□□□ 1.2
SSNA1-201ENST00000322310 VCPP55072 806 aaKnown RBP22.57■■□□□ 1.2
SSNA1-201ENST00000322310 PKN1Q16512 942 aa22.57■■□□□ 1.2
SSNA1-201ENST00000322310 NPAS4Q8IUM7 802 aa22.57■■□□□ 1.2
SSNA1-201ENST00000322310 SMARCC2Q8TAQ2 1214 aa22.57■■□□□ 1.2
SSNA1-201ENST00000322310 ERAP1Q9NZ08 941 aa22.57■■□□□ 1.2
SSNA1-201ENST00000322310 GSTTP1A0A1W2PQM5 241 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 PPFIA3O75145 1194 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 KCNA2P16389 499 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 TMEM62Q0P6H9 643 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 NLRX1Q86UT6 975 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 GIMAP8Q8ND71 665 aaPredicted RBP22.56■■□□□ 1.2
SSNA1-201ENST00000322310 GLG1Q92896 1179 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 PHF7Q9BWX1 381 aaPredicted RBP22.56■■□□□ 1.2
SSNA1-201ENST00000322310 PKD2L1Q9P0L9 805 aa22.56■■□□□ 1.2
SSNA1-201ENST00000322310 KAT6AQ92794 2004 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 ZDBF2Q9HCK1 2354 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
SSNA1-201ENST00000322310 PER2O15055 1255 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 GFRA3O60609 400 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 IBSPP21815 317 aaPredicted RBP22.55■■□□□ 1.2
SSNA1-201ENST00000322310 SIGLEC14Q08ET2 396 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 TROAPQ12815 778 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 OSBPL3Q9H4L5 887 aa22.55■■□□□ 1.2
SSNA1-201ENST00000322310 HIP1O00291 1037 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 MEIS2O14770 477 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 XRRA1Q6P2D8 792 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 VN1R2Q8NFZ6 395 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 SEPT1Q8WYJ6 367 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 ASIC4Q96FT7 647 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 FTHL17Q9BXU8 183 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 TLE6Q9H808 572 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 PADI3Q9ULW8 664 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 PLXNA4Q9HCM2 1894 aa22.54■■□□□ 1.2
SSNA1-201ENST00000322310 STAG3L1P0CL83 205 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 SCG2P13521 617 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 INSRRP14616 1297 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 IER5Q5VY09 327 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 MICAL1Q8TDZ2 1067 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 CUL5Q93034 780 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 GPRASP2Q96D09 838 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 SMARCAD1Q9H4L7 1026 aa22.53■■□□□ 1.2
SSNA1-201ENST00000322310 ITGB5P18084 799 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 TRDNQ13061 729 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 PAK2Q13177 524 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 WTAPQ15007 396 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 CHD1LQ86WJ1 897 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 TRAPPC12Q8WVT3 735 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 TRPV2Q9Y5S1 764 aa22.52■■□□□ 1.2
SSNA1-201ENST00000322310 MYO15AQ9UKN7 3530 aa22.52■■□□□ 1.19
SSNA1-201ENST00000322310 ERICH2A1L162 156 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 PIK3CDO00329 1044 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 AVPR2P30518 371 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 TMEM266Q2M3C6 531 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 SUSD6Q92537 303 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 PCYT2Q99447 389 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 TMX1Q9H3N1 280 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 LRFN2Q9ULH4 789 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 TAF6LQ9Y6J9 622 aa22.51■■□□□ 1.19
SSNA1-201ENST00000322310 SQORQ9Y6N5 450 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms