RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 POTECB2RU33 542 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 PPP1R3GB7ZBB8 358 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 PSMC2P35998 433 aaKnown RBP16.73■□□□□ 0.27
GCFC2-201ENST00000321027 MAP2K2P36507 400 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 CLNS1AP54105 237 aaKnown RBP16.73■□□□□ 0.27
GCFC2-201ENST00000321027 NTRK3Q16288 839 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 HOMER3Q9NSC5 361 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 TRIM66O15016 1216 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 CTNND1O60716 968 aaKnown RBP16.73■□□□□ 0.27
GCFC2-201ENST00000321027 XKR9Q5GH70 373 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 TTLL6Q8N841 843 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 PIGOQ8TEQ8 1089 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 VPS37BQ9H9H4 285 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 KLRK1P26718 216 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 MYL7Q01449 175 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 PPP2R5EQ16537 467 aa16.73■□□□□ 0.27
GCFC2-201ENST00000321027 SDCCAG8Q86SQ7 713 aaPredicted RBP16.73■□□□□ 0.27
GCFC2-201ENST00000321027 LMNB1P20700 586 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 KLK7P49862 253 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 NT5C2P49902 561 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 TROAPQ12815 778 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 TAB3Q8N5C8 712 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 TBC1D16Q8TBP0 767 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 ANO3Q9BYT9 981 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 INTS9Q9NV88 658 aaKnown RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 PARP2Q9UGN5 583 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 PSMD6Q15008 389 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 CASC4Q6P4E1 433 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 FBXO33Q7Z6M2 555 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 CTAGE3PQ8IX95 158 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 ANAPC4Q9UJX5 808 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 hCG_1984214I3L0E3 225 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 DKC1O60832 514 aaKnown RBP eCLIP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 COASYQ13057 564 aa16.72■□□□□ 0.27
GCFC2-201ENST00000321027 ZNF713Q8N859 430 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-201ENST00000321027 PVALEFA0A1B0GWK0 134 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 MRPS9P82933 396 aaKnown RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 CTTNQ14247 550 aaKnown RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 BSPRYQ5W0U4 402 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 DCAF15Q66K64 600 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 CCDC110Q8TBZ0 833 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 PLAAQ9Y263 795 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 DAPK3O43293 454 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 FGGP02679 453 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 KCNB1Q14721 858 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 PNKPQ96T60 521 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 USP17L10C9JJH3 530 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 SLC8A3P57103 927 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 SNX1Q13596 522 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 SEPT2Q15019 361 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 GUF1Q8N442 669 aaKnown RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 WHAMMQ8TF30 809 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 RAD54LQ92698 747 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 RNF34Q969K3 372 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 CCSER1Q9C0I3 900 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 DDX47Q9H0S4 455 aaKnown RBP16.71■□□□□ 0.27
GCFC2-201ENST00000321027 CD2APQ9Y5K6 639 aa16.71■□□□□ 0.27
GCFC2-201ENST00000321027 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 ANKRD20A3Q5VUR7 823 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 ARHGEF16Q5VV41 709 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 NEDD1Q8NHV4 660 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 IFT172Q9UG01 1749 aa16.71■□□□□ 0.26
GCFC2-201ENST00000321027 THAP12O43422 761 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 STAT2P52630 851 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 ZKSCAN8Q15776 578 aaPredicted RBP16.7■□□□□ 0.26
GCFC2-201ENST00000321027 AOC3Q16853 763 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 SPATS2Q86XZ4 545 aaKnown RBP16.7■□□□□ 0.26
GCFC2-201ENST00000321027 SP8Q8IXZ3 490 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 CEP72Q9P209 647 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
GCFC2-201ENST00000321027 FEZ2Q9UHY8 353 aaPredicted RBP16.7■□□□□ 0.26
GCFC2-201ENST00000321027 POTEFA5A3E0 1075 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 CIB2O75838 187 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 ERVK-24P63145 666 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 POTEGQ6S5H5 508 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 POTEEQ6S8J3 1075 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 PHLDB2Q86SQ0 1253 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 MS4A14Q96JA4 679 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 PBKQ96KB5 322 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 TEKT3Q9BXF9 490 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 FAM114A2Q9NRY5 505 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 CNTNAP4Q9C0A0 1308 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 ECE2O60344 883 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 SRGNP10124 158 aa16.7■□□□□ 0.26
GCFC2-201ENST00000321027 ATF7P17544 494 aaPredicted RBP16.7■□□□□ 0.26
GCFC2-201ENST00000321027 E2F5Q15329 346 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms