RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ABCB5Q2M3G0 1257 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 C8orf74Q6P047 294 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 IFT81Q8WYA0 676 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 ARMCX3Q9UH62 379 aaPredicted RBP19.15■□□□□ 0.66
COL9A1-201ENST00000320755 FAM184BQ9ULE4 1060 aa19.15■□□□□ 0.66
COL9A1-201ENST00000320755 ZSCAN5CA6NGD5 496 aaPredicted RBP19.14■□□□□ 0.66
COL9A1-201ENST00000320755 SPATA31C1P0DKV0 1188 aa19.14■□□□□ 0.66
COL9A1-201ENST00000320755 JAG1P78504 1218 aa19.14■□□□□ 0.66
COL9A1-201ENST00000320755 MAPK8IP2Q13387 824 aaPredicted RBP19.14■□□□□ 0.66
COL9A1-201ENST00000320755 ERMNQ8TAM6 284 aa19.14■□□□□ 0.66
COL9A1-201ENST00000320755 NAP1L4Q99733 375 aaKnown RBP19.14■□□□□ 0.66
COL9A1-201ENST00000320755 EDEM3Q9BZQ6 932 aa19.14■□□□□ 0.66
COL9A1-201ENST00000320755 RABEP2Q9H5N1 569 aa19.14■□□□□ 0.66
COL9A1-201ENST00000320755 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.66
COL9A1-201ENST00000320755 PJA2O43164 708 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 DNAJC21Q5F1R6 531 aaKnown RBP19.14■□□□□ 0.65
COL9A1-201ENST00000320755 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.65
COL9A1-201ENST00000320755 ETNPPLQ8TBG4 499 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 DCAF4Q8WV16 495 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 ZDHHC15Q96MV8 337 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 NYAP2Q9P242 653 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 PCDHB13Q9Y5F0 798 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 MYO3BQ8WXR4 1341 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 AGPSO00116 658 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 GCNT3O95395 438 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 NOP2P46087 812 aaKnown RBP19.14■□□□□ 0.65
COL9A1-201ENST00000320755 CASP4P49662 377 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 GLT8D2Q9H1C3 349 aa19.14■□□□□ 0.65
COL9A1-201ENST00000320755 ZBTB39O15060 712 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 SPIRE1Q08AE8 756 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 CTTNQ14247 550 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 SLC18A3Q16572 532 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 CFAP221Q4G0U5 840 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 LUC7LQ9NQ29 371 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 STIM2Q9P246 746 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 LCMT1Q9UIC8 334 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 ZC3H4Q9UPT8 1303 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 PRLRP16471 622 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 PTK2Q05397 1052 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 KNOP1Q1ED39 458 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 AENQ8WTP8 325 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 RUSC1Q9BVN2 902 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 NUCKS1Q9H1E3 243 aaKnown RBP19.13■□□□□ 0.65
COL9A1-201ENST00000320755 EHD4Q9H223 541 aa19.13■□□□□ 0.65
COL9A1-201ENST00000320755 UBR3Q6ZT12 1888 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 THSD7AQ9UPZ6 1657 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 MSH4O15457 936 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 CFBP00751 764 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 AARSP49588 968 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL9A1-201ENST00000320755 SYDE2Q5VT97 1194 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 MKL1Q969V6 931 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 CWC15Q9P013 229 aaKnown RBP19.12■□□□□ 0.65
COL9A1-201ENST00000320755 RSPH14Q9UHP6 348 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 ANKRD65E5RJM6 399 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 EML1O00423 815 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 HOXD13P35453 343 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 GJB7Q6PEY0 223 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 KSR1Q8IVT5 923 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 TPH2Q8IWU9 490 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 RNF10Q8N5U6 811 aaKnown RBP19.12■□□□□ 0.65
COL9A1-201ENST00000320755 SPATA31A6Q5VVP1 1343 aa19.12■□□□□ 0.65
COL9A1-201ENST00000320755 CYP3A7-CYP3A51PA0A087WV96 503 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 AKAP3O75969 853 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 CYP3A7P24462 503 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 RPA1P27694 616 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 NAB2Q15742 525 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 PODNQ7Z5L7 613 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 NLGN1Q8N2Q7 840 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 PROCA1Q8NCQ7 364 aaPredicted RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 LENG9Q96B70 501 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 TBCAO75347 108 aaKnown RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 XRCC5P13010 732 aaKnown RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 POLD1P28340 1107 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 EXOC3L4Q17RC7 722 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 TTC19Q6DKK2 380 aaPredicted RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 KRT12Q99456 494 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GANQ9H2C0 597 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 SMCHD1A6NHR9 2005 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GOLGA6CA6NDK9 693 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 ECE2O60344 883 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GLI1P08151 1106 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GOLGA6DP0CG33 693 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 BMP3P12645 472 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 IRX5P78411 483 aaPredicted RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GUCY2DQ02846 1103 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 MUM1L1Q5H9M0 696 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 TMEM179Q6ZVK1 233 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 SYT2Q8N9I0 419 aaPredicted RBP19.11■□□□□ 0.65
COL9A1-201ENST00000320755 EPB41L5Q9HCM4 733 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 GOLGA6AQ9NYA3 693 aa19.11■□□□□ 0.65
COL9A1-201ENST00000320755 UCHL3P15374 230 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 ZYXQ15942 572 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 ZNF571Q7Z3V5 609 aaPredicted RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 KLHL7Q8IXQ5 586 aa19.1■□□□□ 0.65
COL9A1-201ENST00000320755 TSEN2Q8NCE0 465 aaKnown RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 SYN2Q92777 582 aaPredicted RBP19.1■□□□□ 0.65
COL9A1-201ENST00000320755 MASTLQ96GX5 879 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms