RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 COL1A1P02452 1464 aaPredicted RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 A0A087X0B3 334 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 MFAP3LO75121 409 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 FDX1P10109 184 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 EPHA7Q15375 998 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 FAM133AQ8N9E0 248 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 MRIQ9BWK5 157 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 GCNT4Q9P109 453 aa10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 ABT1Q9ULW3 272 aaKnown RBP10.18□□□□□ -0.78
TMEM39A-201ENST00000319172 NEFHP12036 1026 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 BACE1P56817 501 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 MYL7Q01449 175 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 KIAA0753Q2KHM9 967 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 KCNG1Q9UIX4 513 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 A0A1W2PRG0 241 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 ENC1O14682 589 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 AP5Z1O43299 807 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 SPOPO43791 374 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 RHOBTB3O94955 611 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 NR3C1P04150 777 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 CD44P16070 742 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 FXR2P51116 673 aaKnown RBP eCLIP10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 TERF1P54274 439 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 OSTNP61366 133 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 ZBED6P86452 979 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 GRB10Q13322 594 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 RBM43Q6ZSC3 357 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 REEP2Q9BRK0 252 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 FAM184BQ9ULE4 1060 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 CEP83Q9Y592 693 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 GSTTP1A0A1W2PQM5 241 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 ANKRD62A6NC57 917 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 EYA4O95677 639 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 ICAM1P05362 532 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 MCM3P25205 808 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 KNOP1Q1ED39 458 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 Q3C1V9 767 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 CATSPER3Q86XQ3 398 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 IQCDQ96DY2 449 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 NLRP4Q96MN2 994 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 C7orf25Q9BPX7 421 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 TMEM206Q9H813 350 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 AKT3Q9Y243 479 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 GOLGA6L10A0A0M3HER8 536 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 USP27XA6NNY8 438 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 FMNL3Q8IVF7 1028 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 CCDC50Q8IVM0 306 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 HAUS4Q9H6D7 363 aa10.17□□□□□ -0.78
TMEM39A-201ENST00000319172 PKD1L3Q7Z443 1732 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 RRP9O43818 475 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 ARP10275 920 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 EIF4A3P38919 411 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 PSMC5P62195 406 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 GABPAQ06546 454 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 ERCC6LQ2NKX8 1250 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 CYFIP1Q7L576 1253 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 ZBTB33Q86T24 672 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 SLC35F6Q8N357 371 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 IFT81Q8WYA0 676 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 MXRA8Q9BRK3 442 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 KCNF1Q9H3M0 494 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 PCDHA10Q9Y5I2 948 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 TTC26A0AVF1 554 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 ADM5C9JUS6 153 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 H0YCG3 227 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 K7ERI5 159 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 TBX3O15119 743 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 HIP1RO75146 1068 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP2R5AQ15172 486 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 TOGARAM2Q6ZUX3 1019 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP1R3GB7ZBB8 358 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 CEP104O60308 925 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 MED24O75448 989 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 GFPT2O94808 682 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 TMOD1P28289 359 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 DGKZQ13574 1117 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 NUDT12Q9BQG2 462 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 ADARB2Q9NS39 739 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 C1orf112Q9NSG2 853 aa10.16□□□□□ -0.78
TMEM39A-201ENST00000319172 NHSL1Q5SYE7 1610 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 RPA1P27694 616 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PLA2G4FQ68DD2 849 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 TAX1BP1Q86VP1 789 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 ANKRD13AQ8IZ07 590 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 GIMAP8Q8ND71 665 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 HINFPQ9BQA5 517 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PLVAPQ9BX97 442 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PRDM10Q9NQV6 1147 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 PPP1R9AQ9ULJ8 1098 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 NDUFA10O95299 355 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SREBF1P36956 1147 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 MXI1P50539 228 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 NPEPPSP55786 919 aa10.15□□□□□ -0.78
TMEM39A-201ENST00000319172 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms