RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 TFDP2Q14188 446 aa20.46■□□□□ 0.87
UBE2N-201ENST00000318066 FAM149B1Q96BN6 582 aa20.46■□□□□ 0.87
UBE2N-201ENST00000318066 FAM133BQ5BKY9 247 aaKnown RBP20.45■□□□□ 0.86
UBE2N-201ENST00000318066 CC2D2BQ6DHV5 1058 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 ARMCX2Q7L311 632 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 PITPNM3Q9BZ71 974 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 ADAM21Q9UKJ8 722 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 KRT38O76015 456 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 TRAIPQ9BWF2 469 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 BRIP1Q9BX63 1249 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 NR5A1Q13285 461 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 LRRC41Q15345 812 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 NUGGCQ68CJ6 796 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 CXorf38Q8TB03 319 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 CEP170P1Q96L14 293 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 EDEM3Q9BZQ6 932 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 ADGBQ8N7X0 1667 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 PNMA6FA0A0J9YX94 578 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 CD2BP2O95400 341 aaKnown RBP20.45■□□□□ 0.86
UBE2N-201ENST00000318066 ARL4CP56559 192 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 SNX1Q13596 522 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 MAGI2Q86UL8 1455 aa20.45■□□□□ 0.86
UBE2N-201ENST00000318066 LRRN2O75325 713 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 CCNYQ8ND76 341 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 ANO3Q9BYT9 981 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 SMYD2Q9NRG4 433 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 ZSWIM5Q9P217 1185 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 ICE2Q659A1 982 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 RSRC2Q7L4I2 434 aaKnown RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 PUS3Q9BZE2 481 aaKnown RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 TLR7Q9NYK1 1049 aaKnown RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 FOXP2O15409 715 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 SPAG7O75391 227 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 CC2D1AQ6P1N0 951 aaPredicted RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 PAGR1Q9BTK6 254 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 TTC37Q6PGP7 1564 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 GSTA4O15217 222 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 ZBED1O96006 694 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 RFX1P22670 979 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 KLHL38Q2WGJ6 581 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 LRRC23Q53EV4 343 aaPredicted RBP20.44■□□□□ 0.86
UBE2N-201ENST00000318066 PIGSQ96S52 555 aa20.44■□□□□ 0.86
UBE2N-201ENST00000318066 TOM1L1O75674 476 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 CCND2P30279 289 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 KIAA0825Q8IV33 1275 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 OSBP2Q969R2 916 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 PCDHB6Q9Y5E3 794 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 TAC1P20366 129 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 IGBP1P78318 339 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 SPOUT1Q5T280 376 aaKnown RBP20.43■□□□□ 0.86
UBE2N-201ENST00000318066 KLC2Q9H0B6 622 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 SLAIN2Q9P270 581 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 NEO1Q92859 1461 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 CXCR5P32302 372 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 BBS9Q3SYG4 887 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 TAF1BQ53T94 588 aaPredicted RBP20.43■□□□□ 0.86
UBE2N-201ENST00000318066 CLEC17AQ6ZS10 378 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 MCUQ8NE86 351 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 CALN1Q9BXU9 219 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 LRRC4Q9HBW1 653 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 NFU1Q9UMS0 254 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 PLAAQ9Y263 795 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 ARL13BQ3SXY8 428 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 SPOPLQ6IQ16 392 aa20.43■□□□□ 0.86
UBE2N-201ENST00000318066 CPSF3Q9UKF6 684 aaKnown RBP20.43■□□□□ 0.86
UBE2N-201ENST00000318066 PSAPP07602 524 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 HNRNPH2P55795 449 aaKnown RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 PTPN12Q05209 780 aaKnown RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 ADAMTS1Q9UHI8 967 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 GOLGA8SH3BPF8 625 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 MYO1CO00159 1063 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 FGGP02679 453 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 SYDE2Q5VT97 1194 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 GRAMD1AQ96CP6 724 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 ABHD10Q9NUJ1 306 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 CFAP73A6NFT4 308 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 INO80B-WBP1J3KQ70 363 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 MMEP08473 750 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 NFKBIAP25963 317 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 GOLGA8FQ08AF8 430 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 GOLGA8DPQ0D2H9 430 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 PPP1R18Q6NYC8 613 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 PSPC1Q8WXF1 523 aaKnown RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 INO80BQ9C086 356 aaPredicted RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 ALDH8A1Q9H2A2 487 aaPredicted RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 FAM187AA6NFU0 413 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 STAT2P52630 851 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 SIK1P57059 783 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 CYP27A1Q02318 531 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
UBE2N-201ENST00000318066 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
UBE2N-201ENST00000318066 CLIC2O15247 247 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 GRAMD1CQ8IYS0 662 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 PI4K2BQ8TCG2 481 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 KPNA7A9QM74 516 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 KCNJ6P48051 423 aa20.41■□□□□ 0.86
UBE2N-201ENST00000318066 FOXP4Q8IVH2 680 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms