RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 USP28Q96RU2 1077 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ORC6Q9Y5N6 252 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 GOLGA8TH3BQL2 631 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SHOX2O60902 331 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 DEAF1O75398 565 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 GOLGA8HP0CJ92 632 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 PECAM1P16284 738 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 E4F1Q66K89 784 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 FMR1NBQ8N0W7 255 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 DNAJC9Q8WXX5 260 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.86□□□□□ -1.636e-7■■□□□ 11.9
CNOT1-201ENST00000317147 FTOQ9C0B1 505 aaKnown RBP eCLIP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 UPF3AQ9H1J1 476 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CEP72Q9P209 647 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TUBE1Q9UJT0 475 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SCN9AQ15858 1988 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF839A8K0R7 811 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 POLR2EP19388 210 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ATP1A2P50993 1020 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 DR1Q01658 176 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TRMT5Q32P41 509 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 NAA35Q5VZE5 725 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 MPRIPQ6WCQ1 1025 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ANKRD13DQ6ZTN6 518 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 C11orf57Q6ZUT1 292 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SCYL3Q8IZE3 742 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SH3TC2Q8TF17 1288 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 JADE3Q92613 823 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 KCNB2Q92953 911 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TUBGCP2Q9BSJ2 902 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 EPS8L2Q9H6S3 715 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 RSL24D1Q9UHA3 163 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 IQANK1A0A1B0GTG1 560 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 LSM1O15116 133 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ECEL1O95672 775 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 MARK3P27448 753 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 RFC1P35251 1148 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 EIF4A2Q14240 407 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 PTPN21Q16825 1174 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 KLHL38Q2WGJ6 581 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 WASHC2DQ5SRD0 308 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ATAD3BQ5T9A4 648 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SPATA31D1Q6ZQQ2 1576 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SLFN12Q8IYM2 578 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 RIN3Q8TB24 985 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 RIOK1Q9BRS2 568 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 DMAP1Q9NPF5 467 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 SORCS3Q9UPU3 1222 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ZHX2Q9Y6X8 837 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 NFAT5O94916 1531 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CACNA1HO95180 2353 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 IFNAR1P17181 557 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 IGBP1P78318 339 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 IKQ13123 557 aaPredicted RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CC2D2BQ6DHV5 1058 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 DIS3L2Q8IYB7 885 aaKnown RBP4.86□□□□□ -1.63
CNOT1-201ENST00000317147 C15orf41Q9Y2V0 281 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 GMEB1Q9Y692 573 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ATP8B3O60423 1300 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CPS1P31327 1500 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TBKBP1A7MCY6 615 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 C4BPBP20851 252 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TFAP4Q01664 338 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 PPP2R5CQ13362 524 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 LONRF3Q496Y0 759 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TNNI3KQ59H18 835 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 FOXR2Q6PJQ5 311 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CDKL2Q92772 493 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 INPP5DQ92835 1189 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 CD209Q9NNX6 404 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 ANGPTL3Q9Y5C1 460 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 FPGT-TNNI3KV9GXZ4 949 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 PCDH11XQ9BZA7 1347 aa4.86□□□□□ -1.63
CNOT1-201ENST00000317147 TLDC2A0PJX2 215 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CPA3P15088 417 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ATF2P15336 505 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 GAP43P17677 238 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SERPINB3P29508 390 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF76P36508 570 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 PHEXP78562 749 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SCRN1Q12765 414 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 IRGCQ6NXR0 463 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MAP7D3Q8IWC1 876 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ZNF398Q8TD17 642 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CMTM5Q96DZ9 223 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ANKIB1Q9P2G1 1089 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 SNX12Q9UMY4 172 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MROH5Q6ZUA9 1318 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 CDHR2Q9BYE9 1310 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NCKAP5LQ9HCH0 1330 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 ABCA7Q8IZY2 2146 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 USP27XA6NNY8 438 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 H3BNX3 289 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 KRT37O76014 449 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 RPN1P04843 607 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 IL13P35225 146 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 TMED10P49755 219 aaKnown RBP4.85□□□□□ -1.63
CNOT1-201ENST00000317147 BLVRAP53004 296 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 NUP107P57740 925 aa4.85□□□□□ -1.63
CNOT1-201ENST00000317147 MAP3K10Q02779 954 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms