RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 MIEF2Q96C03 454 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 TBC1D31Q96DN5 1066 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 UBA5Q9GZZ9 404 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 NUCKS1Q9H1E3 243 aaKnown RBP17.84■□□□□ 0.45
CACFD1-202ENST00000316948 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 C6orf50Q9HD87 102 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 ABCB11O95342 1321 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 WNK3Q9BYP7 1800 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 KRIT1O00522 736 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 KCNK18Q7Z418 384 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 MYOCDQ8IZQ8 938 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 PIGSQ96S52 555 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
CACFD1-202ENST00000316948 COL16A1Q07092 1604 aaPredicted RBP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 PPP1R12BO60237 982 aaPredicted RBP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 FKBP3Q00688 224 aaKnown RBP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 DHX9Q08211 1270 aaKnown RBP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 IFFO1Q0D2I5 559 aa17.83■□□□□ 0.45
CACFD1-202ENST00000316948 SCFD2Q8WU76 684 aa17.83■□□□□ 0.45
CACFD1-202ENST00000316948 CELF4Q9BZC1 486 aaKnown RBP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 ANKIB1Q9P2G1 1089 aa17.83■□□□□ 0.45
CACFD1-202ENST00000316948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.45
CACFD1-202ENST00000316948 FAM170AA1A519 330 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
CACFD1-202ENST00000316948 EPS15P42566 896 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 CALCRLQ16602 461 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 SOGA3Q5TF21 947 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 PTF1AQ7RTS3 328 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 SNX29Q8TEQ0 813 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 TATDN2Q93075 761 aa17.83■□□□□ 0.44
CACFD1-202ENST00000316948 CDCA7Q9BWT1 371 aaPredicted RBP17.83■□□□□ 0.44
CACFD1-202ENST00000316948 NOC2LQ9Y3T9 749 aaKnown RBP17.83■□□□□ 0.44
CACFD1-202ENST00000316948 GNA11P29992 359 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 CLNS1AP54105 237 aaKnown RBP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 MSL1Q68DK7 614 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 CCDC50Q8IVM0 306 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 SYN2Q92777 582 aaPredicted RBP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 UIMC1Q96RL1 719 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 EYA3Q99504 573 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 SPZ1Q9BXG8 430 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 BAIAP2L1Q9UHR4 511 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 PGRMC1O00264 195 aaKnown RBP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 TTI1O43156 1089 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 ACTN1P12814 892 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 USP11P51784 963 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 PTK2Q05397 1052 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 METTL13Q8N6R0 699 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 FGFBP2Q9BYJ0 223 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 SEC63Q9UGP8 760 aaKnown RBP17.82■□□□□ 0.44
CACFD1-202ENST00000316948 ROBO3Q96MS0 1386 aa17.82■□□□□ 0.44
CACFD1-202ENST00000316948 BAG3O95817 575 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 PPP1R7Q15435 360 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 HIBCHQ6NVY1 386 aaPredicted RBP17.81■□□□□ 0.44
CACFD1-202ENST00000316948 C3orf20Q8ND61 904 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 RAD54LQ92698 747 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 RIC8AQ9NPQ8 531 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 STK17AQ9UEE5 414 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 ATP8A1Q9Y2Q0 1164 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 SLC37A4O43826 429 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 CDK8P49336 464 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 CACNB1Q02641 598 aaPredicted RBP17.81■□□□□ 0.44
CACFD1-202ENST00000316948 AGBL2Q5U5Z8 902 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 CCT6BQ92526 530 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 GJA10Q969M2 543 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 PBKQ96KB5 322 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 LZTS2Q9BRK4 669 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 IRS2Q9Y4H2 1338 aa17.81■□□□□ 0.44
CACFD1-202ENST00000316948 CTNND1O60716 968 aaKnown RBP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 TDP2O95551 362 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 GCFC2P16383 781 aaKnown RBP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 DRD4P21917 467 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 PAX7P23759 505 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 MTMR3Q13615 1198 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 TMC3Q7Z5M5 1100 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 PSMD1Q99460 953 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 PNMA2Q9UL42 364 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 C5orf60A6NFR6 353 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 TM4SF1P30408 202 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 GBP2P32456 591 aaPredicted RBP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 COASYQ13057 564 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 TMEM266Q2M3C6 531 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 ZNF571Q7Z3V5 609 aaPredicted RBP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 ACTRT1Q8TDG2 376 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 COA7Q96BR5 231 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 CEP95Q96GE4 821 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 NYXQ9GZU5 481 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
CACFD1-202ENST00000316948 FRMPD2Q68DX3 1309 aaPredicted RBP17.8■□□□□ 0.44
CACFD1-202ENST00000316948 SMIM23A6NLE4 172 aa17.79■□□□□ 0.44
CACFD1-202ENST00000316948 F8W031 263 aaPredicted RBP17.79■□□□□ 0.44
CACFD1-202ENST00000316948 XRCC4Q13426 336 aa17.79■□□□□ 0.44
CACFD1-202ENST00000316948 NFIXQ14938 502 aa17.79■□□□□ 0.44
CACFD1-202ENST00000316948 KRT79Q5XKE5 535 aa17.79■□□□□ 0.44
CACFD1-202ENST00000316948 PEX26Q7Z412 305 aa17.79■□□□□ 0.44
CACFD1-202ENST00000316948 PROM2Q8N271 834 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms