RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 CNNM3Q8NE01 707 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 COPS5Q92905 334 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 MTMR9Q96QG7 549 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 PCDHA12Q9UN75 941 aa17.31■□□□□ 0.36
HNF4A-202ENST00000316673 KBTBD13C9JR72 458 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 PSMD10O75832 226 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 PGK1P00558 417 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 SFNP31947 248 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
HNF4A-202ENST00000316673 DGKDQ16760 1214 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
HNF4A-202ENST00000316673 RDM1Q8NG50 284 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 HAS1Q92839 578 aa17.3■□□□□ 0.36
HNF4A-202ENST00000316673 LENG1Q96BZ8 264 aaPredicted RBP17.3■□□□□ 0.36
HNF4A-202ENST00000316673 MOXD2PA6NHM9 499 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 DNM1LO00429 736 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 WNT7AO00755 349 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 JAK3P52333 1124 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 PPP2R5CQ13362 524 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 LRRC41Q15345 812 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 CAMK4Q16566 473 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 TMEM63BQ5T3F8 832 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
HNF4A-202ENST00000316673 KLHDC9Q8NEP7 349 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 AFG1LQ8WV93 481 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 SEPT1Q8WYJ6 367 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 SYMPKQ92797 1274 aaKnown RBP17.29■□□□□ 0.36
HNF4A-202ENST00000316673 CALML4Q96GE6 196 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 CCSER1Q9C0I3 900 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 MAGEF1Q9HAY2 307 aa17.29■□□□□ 0.36
HNF4A-202ENST00000316673 FRMPD3Q5JV73 1810 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 CENPFP49454 3210 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
HNF4A-202ENST00000316673 CABYRO75952 493 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 MMP3P08254 477 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
HNF4A-202ENST00000316673 TXKP42681 527 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 KRBA2Q6ZNG9 492 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 GPR20Q99678 358 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 TMEM60Q9H2L4 133 aa17.28■□□□□ 0.36
HNF4A-202ENST00000316673 TTC12Q9H892 705 aaPredicted RBP17.28■□□□□ 0.36
HNF4A-202ENST00000316673 ACTR2P61160 394 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 KRT79Q5XKE5 535 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 ERMNQ8TAM6 284 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 CDK5RAP3Q96JB5 506 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 LRWD1Q9UFC0 647 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 PCDHA10Q9Y5I2 948 aa17.27■□□□□ 0.36
HNF4A-202ENST00000316673 DDX39AO00148 427 aaKnown RBP17.26■□□□□ 0.35
HNF4A-202ENST00000316673 SMC2O95347 1197 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 ATG7O95352 703 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
HNF4A-202ENST00000316673 PSAPP07602 524 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 MRE11P49959 708 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 SP4Q02446 784 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 KCNA10Q16322 511 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 CCSAPQ6IQ19 270 aaPredicted RBP17.26■□□□□ 0.35
HNF4A-202ENST00000316673 B3GNT9Q6UX72 402 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 ANP32BQ92688 251 aaKnown RBP17.26■□□□□ 0.35
HNF4A-202ENST00000316673 SEZ6LQ9BYH1 1024 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 AZI2Q9H6S1 392 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 DISC1Q9NRI5 854 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 SAMM50Q9Y512 469 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
HNF4A-202ENST00000316673 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 CCNE2O96020 404 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 MYL1P05976 194 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 SLFN14P0C7P3 912 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 TCF7P36402 384 aaPredicted RBP17.25■□□□□ 0.35
HNF4A-202ENST00000316673 STAT6P42226 847 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 TECP42680 631 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 SLC26A2P50443 739 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 BEX3Q00994 111 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 SPECC1Q5M775 1068 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 RRAGBQ5VZM2 374 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 FAM160B1Q5W0V3 765 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 HAUS3Q68CZ6 603 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 MIER3Q7Z3K6 550 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 CABP7Q86V35 215 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 EPSTI1Q96J88 318 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 KATNAL1Q9BW62 490 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 LRRC27Q9C0I9 530 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 NAT10Q9H0A0 1025 aaKnown RBP17.25■□□□□ 0.35
HNF4A-202ENST00000316673 BCAS3Q9H6U6 928 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 ANO10Q9NW15 660 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 VAV3Q9UKW4 847 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 ZNF215Q9UL58 517 aaPredicted RBP17.25■□□□□ 0.35
HNF4A-202ENST00000316673 PHF24Q9UPV7 400 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 DOCK5Q9H7D0 1870 aa17.25■□□□□ 0.35
HNF4A-202ENST00000316673 SORBS3O60504 671 aa17.24■□□□□ 0.35
HNF4A-202ENST00000316673 DKC1O60832 514 aaKnown RBP eCLIP17.24■□□□□ 0.351e-7■■■■■ 118
HNF4A-202ENST00000316673 ASGR1P07306 291 aa17.24■□□□□ 0.35
HNF4A-202ENST00000316673 ACLYP53396 1101 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms