RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 PPARDQ03181 441 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 HOOK2Q96ED9 719 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 RILPQ96NA2 401 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 KRT12Q99456 494 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 FOXN1O15353 648 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ZBED4O75132 1171 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 POLR2MP0CAP2 368 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 PDHBP11177 359 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 CASP1P29466 404 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 CCT6BQ92526 530 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ATP2A3Q93084 1043 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 AKT1S1Q96B36 256 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 CUEDC2Q9H467 287 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 MRPL44Q9H9J2 332 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 VCX3AQ9NNX9 186 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 MORC2Q9Y6X9 1032 aaPredicted RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 MYH14Q7Z406 1995 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 C4BP0C0L5 1744 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 GCNT3O95395 438 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 CCDC89Q8N998 374 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 CCHCR1Q8TD31 782 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 EXOC3O60645 756 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
HNF4A-201ENST00000316099 MRPL11Q9Y3B7 192 aaKnown RBP11.7□□□□□ -0.54
HNF4A-201ENST00000316099 B4DLN1 442 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 IL9RQ01113 521 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 NNTQ13423 1086 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 STXBP3O00186 592 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 THAP12O43422 761 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 MAN1A1P33908 653 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 SF3A3Q12874 501 aaKnown RBP eCLIP11.69□□□□□ -0.546e-14■■□□□ 13.3
HNF4A-201ENST00000316099 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 TADA2BQ86TJ2 420 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 RIC8AQ9NPQ8 531 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 GLI3P10071 1580 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 CRCPO75575 148 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ALAS1P13196 640 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 AK8Q96MA6 479 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ZDHHC15Q96MV8 337 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 JPH2Q9BR39 696 aaPredicted RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 TPX2Q9ULW0 747 aaKnown RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 F5H6K3 240 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 HEXIM1O94992 359 aaKnown RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 UBXN2AP68543 259 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 KLRC3Q07444 240 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 PKN1Q16512 942 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 DCAF15Q66K64 600 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 LRRC8CQ8TDW0 803 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 DKC1O60832 514 aaKnown RBP eCLIP11.69□□□□□ -0.544e-8■■■■■ 127.7
HNF4A-201ENST00000316099 N4BP1O75113 896 aaKnown RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 ADCY8P40145 1251 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
HNF4A-201ENST00000316099 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 PROM2Q8N271 834 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 PPP4R1Q8TF05 950 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 CCPG1Q9ULG6 757 aa11.69□□□□□ -0.54
HNF4A-201ENST00000316099 HMGB1P1B2RPK0 211 aaPredicted RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 ENC1O14682 589 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 H2AFZP0C0S5 128 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 PTPN21Q16825 1174 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 RCSD1Q6JBY9 416 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 H2AFVQ71UI9 128 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 DHX40Q8IX18 779 aaKnown RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 HOXA13P31271 388 aaPredicted RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 GRIN1Q05586 938 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 ZNF543Q08ER8 600 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 RASIP1Q5U651 963 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 PALM2Q8IXS6 379 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 N4BP2L2Q92802 583 aaPredicted RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 CNOT6LQ96LI5 555 aaKnown RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 AS3MTQ9HBK9 375 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 TACC3Q9Y6A5 838 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 ARHGAP42A6NI28 874 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 NSMFQ6X4W1 530 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 PLA2G4DQ86XP0 818 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 DDX4Q9NQI0 724 aaKnown RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 USTQ9Y2C2 406 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 TCHHQ07283 1943 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 BACH1O14867 736 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
HNF4A-201ENST00000316099 ATF2P15336 505 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 PLCG1P19174 1290 aa11.68□□□□□ -0.54
HNF4A-201ENST00000316099 RFC1P35251 1148 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms