RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 BAP1Q92560 729 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 MMS19Q96T76 1030 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 CNOT7Q9UIV1 285 aaKnown RBP16.43■□□□□ 0.22
CHFR-202ENST00000315585 PRR12Q9ULL5 1215 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 GJA3Q9Y6H8 435 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L15C9J2P7 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L13C9JLJ4 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L11C9JVI0 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L18D6R9N7 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L22D6RA61 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L17D6RBQ6 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L19D6RCP7 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L20D6RJB6 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 RBAK-RBAKDNI3L0D1 243 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 ECE1P42892 770 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L24Q0WX57 530 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 LRRC41Q15345 812 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 ECM1Q16610 540 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 USP17L6PQ6QN14 398 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■■□□ 15.9
CHFR-202ENST00000315585 HDAC6Q9UBN7 1215 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 HYOU1Q9Y4L1 999 aa16.43■□□□□ 0.22
CHFR-202ENST00000315585 CYP11B2P19099 503 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 RPL13P26373 211 aaKnown RBP16.42■□□□□ 0.22
CHFR-202ENST00000315585 RASSF7Q02833 373 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 ADAM9Q13443 819 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 C10orf76Q5T2E6 689 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 CCDC181Q5TID7 509 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 GOLGA6L1Q8N7Z2 621 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 PDE11AQ9HCR9 933 aa16.42■□□□□ 0.22
CHFR-202ENST00000315585 BZW2Q9Y6E2 419 aaKnown RBP16.42■□□□□ 0.22
CHFR-202ENST00000315585 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 E9PMD0 336 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 CALUO43852 315 aaPredicted RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 TDRD12Q587J7 1177 aaKnown RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 TRIM59Q8IWR1 403 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 ZC3H3Q8IXZ2 948 aaKnown RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 SPICE1Q8N0Z3 855 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 MMGT1Q8N4V1 131 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 PCDHA2Q9Y5H9 948 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 A0A0U1RQG5 324 aaPredicted RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 MEIS2O14770 477 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 CIITAP33076 1130 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 SREBF1P36956 1147 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 SLC12A3P55017 1021 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 FRMD5Q7Z6J6 570 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 CAPZA3Q96KX2 299 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 METTL14Q9HCE5 456 aaKnown RBP16.41■□□□□ 0.22
CHFR-202ENST00000315585 MYH7BA7E2Y1 1941 aa16.41■□□□□ 0.22
CHFR-202ENST00000315585 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 POTECB2RU33 542 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 ZNF263O14978 683 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 ETNPPLQ8TBG4 499 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 CRYGNQ8WXF5 182 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 KCTD10Q9H3F6 313 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 TRAF3IP3Q9Y228 551 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 CTNND1O60716 968 aaKnown RBP16.4■□□□□ 0.22
CHFR-202ENST00000315585 SRGAP2O75044 1071 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 KCNMA1Q12791 1236 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 ASTE1Q2TB18 679 aaPredicted RBP16.4■□□□□ 0.22
CHFR-202ENST00000315585 USH1GQ495M9 461 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 GLE1Q53GS7 698 aaKnown RBP16.4■□□□□ 0.22
CHFR-202ENST00000315585 PRR16Q569H4 304 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 KRT26Q7Z3Y9 468 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 APOBEC3FQ8IUX4 373 aaKnown RBP16.4■□□□□ 0.22
CHFR-202ENST00000315585 SCFD1Q8WVM8 642 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 CCDC102AQ96A19 550 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 DUSP10Q9Y6W6 482 aa16.4■□□□□ 0.22
CHFR-202ENST00000315585 SHTN1A0MZ66 631 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 PIK3CDO00329 1044 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 EPHB6O15197 1021 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 PLEKP08567 350 aaPredicted RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 ANXA13P27216 316 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 KNOP1Q1ED39 458 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 LPAR1Q92633 364 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 TEPSINQ96N21 525 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 EHMT1Q9H9B1 1298 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 HACL1Q9UJ83 578 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 PDXKO00764 312 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 CYP3A4P08684 503 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 ZNF76P36508 570 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 NAP1L1P55209 391 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 IFI16Q16666 785 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 CRACR2AQ9BSW2 395 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 POLR3CQ9BUI4 534 aaPredicted RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 LSM14BQ9BX40 385 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 ZHX3Q9H4I2 956 aa16.39■□□□□ 0.21
CHFR-202ENST00000315585 MRPL11Q9Y3B7 192 aaKnown RBP16.39■□□□□ 0.21
CHFR-202ENST00000315585 PHF20L1A8MW92 1017 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms