RNA–Protein interactions for RNA: ENST00000315050.11

TNIP1-201, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-201ENST00000315050 AIPL1Q9NZN9 384 aa13.91□□□□□ -0.18
TNIP1-201ENST00000315050 CEP104O60308 925 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 GCFC2P16383 781 aaKnown RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 PPP1R18Q6NYC8 613 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 USP38Q8NB14 1042 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 AP1M1Q9BXS5 423 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 A0A087WUV0 522 aaPredicted RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 IGKV6D-41A0A0C4DH26 115 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 FAM196BA6NMK8 535 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 TMCO5BA8MYB1 307 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 SNAP25P60880 206 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 TNNC1P63316 161 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 CDC37Q16543 378 aaPredicted RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 SHROOM1Q2M3G4 852 aaPredicted RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 FOXR2Q6PJQ5 311 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 ARHGAP27Q6ZUM4 889 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 IPO4Q8TEX9 1081 aaKnown RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
TNIP1-201ENST00000315050 ARMCX3Q9UH62 379 aaPredicted RBP13.9□□□□□ -0.18
TNIP1-201ENST00000315050 UCHL3P15374 230 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 MARSP56192 900 aaKnown RBP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 PRR16Q569H4 304 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 HYIQ5T013 277 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 DDX42Q86XP3 938 aaKnown RBP eCLIP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 ANO3Q9BYT9 981 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 BCAS3Q9H6U6 928 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 USP40Q9NVE5 1235 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 AHDC1Q5TGY3 1603 aaPredicted RBP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 ERLIN2O94905 339 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 HPDP32754 393 aaPredicted RBP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 SHMT1P34896 483 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 SLC12A3P55017 1021 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 SKOR1P84550 965 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 QRICH1Q2TAL8 776 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 CEP85LQ5SZL2 805 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 IRF2BP2Q7Z5L9 587 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 DHX36Q9H2U1 1008 aaKnown RBP13.89□□□□□ -0.19
TNIP1-201ENST00000315050 PLIN4Q96Q06 1357 aa13.89□□□□□ -0.19
TNIP1-201ENST00000315050 NR1D1P20393 614 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 ALKBH5Q6P6C2 394 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 OR2W6PQ8NHA6 318 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 FAM107BQ9H098 131 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 PLAAQ9Y263 795 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 CLIC2O15247 247 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 KIF4AO95239 1232 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 MYBP10242 640 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 XRCC5P13010 732 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 TAL1P17542 331 aaPredicted RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 GJB7Q6PEY0 223 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 REEP2Q9BRK0 252 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 DDX47Q9H0S4 455 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 KCNMB3Q9NPA1 279 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 MYH7BA7E2Y1 1941 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 RSPH10B2B2RC85 870 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 AKAP3O75969 853 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 AFPP02771 609 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 RSPH10BP0C881 870 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 HOXA7P31268 230 aaPredicted RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 LSP1P33241 339 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 SEC24CP53992 1094 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 WHAMMQ8TF30 809 aa13.88□□□□□ -0.19
TNIP1-201ENST00000315050 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
TNIP1-201ENST00000315050 SERPINB2P05120 415 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 PON1P27169 355 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 CASP4P49662 377 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 KCNA1Q09470 495 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 NFIAQ12857 509 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 GIT2Q14161 759 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 KNOP1Q1ED39 458 aaKnown RBP13.87□□□□□ -0.19
TNIP1-201ENST00000315050 USH1GQ495M9 461 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 CERS5Q8N5B7 392 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 TAF1DQ9H5J8 278 aaPredicted RBP13.87□□□□□ -0.19
TNIP1-201ENST00000315050 AJAP1Q9UKB5 411 aaPredicted RBP13.87□□□□□ -0.19
TNIP1-201ENST00000315050 PCDHB13Q9Y5F0 798 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 SFI1A8K8P3 1242 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 INPP5BP32019 993 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 HOXD13P35453 343 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 USP11P51784 963 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 CACNB3P54284 484 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 KAT2BQ92831 832 aa13.87□□□□□ -0.19
TNIP1-201ENST00000315050 ATP6V1G3Q96LB4 118 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms