RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 SIK3Q9Y2K2 1263 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 AKR1B10O60218 316 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 ERCC3P19447 782 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 GSTO1P78417 241 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 GFPT1Q06210 699 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 DRP2Q13474 957 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 NAA25Q14CX7 972 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 MKNK2Q9HBH9 465 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 ZNF287Q9HBT7 754 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 NMRK2Q9NPI5 230 aa20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 CNOT8Q9UFF9 292 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-201ENST00000311350 ESYT2A0FGR8 921 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 PJA2O43164 708 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 CLSTN1O94985 981 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 EZRP15311 586 aaKnown RBP20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 MAGEA1P43355 309 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 VWA3BQ502W6 1294 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 NEK8Q86SG6 692 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 CCDC84Q86UT8 332 aaPredicted RBP20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 CALML4Q96GE6 196 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 MYH1P12882 1939 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 TMCO5BA8MYB1 307 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 TSPY3P0CV98 308 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 TSPY8P0CW00 308 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 CFAP221Q4G0U5 840 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 GLE1Q53GS7 698 aaKnown RBP20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 MREGQ8N565 214 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 WDR66Q8TBY9 1149 aa20.68■□□□□ 0.9
HERPUD2-201ENST00000311350 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 TRAPPC3O43617 180 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 FTCDO95954 541 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 CCNHP51946 323 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 MAN2A1Q16706 1144 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 CC2D2BQ6DHV5 1058 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 ZNF444Q8N0Y2 327 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 TMEM47Q9BQJ4 181 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 PHF20L1A8MW92 1017 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 PPEF1O14829 653 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 SLC1A4P43007 532 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 CDC37Q16543 378 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 UNC13DQ70J99 1090 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 KIAA0895Q8NCT3 520 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 TRIM6Q9C030 488 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 LRRC4CQ9HCJ2 640 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 SLC12A6Q9UHW9 1150 aa20.67■□□□□ 0.9
HERPUD2-201ENST00000311350 DCDC2CA8MYV0 355 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 RAD51CO43502 376 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 BAG3O95817 575 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 LRRC63Q05C16 580 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 DDX42Q86XP3 938 aaKnown RBP eCLIP20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 KLHL7Q8IXQ5 586 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 GUF1Q8N442 669 aaKnown RBP20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 HPS3Q969F9 1004 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 LRRC27Q9C0I9 530 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 SEMA6BQ9H3T3 888 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 GLTPD2A6NH11 291 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 GBP2P32456 591 aaPredicted RBP20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 HSD17B3P37058 310 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 NAPAP54920 295 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 UAP1Q16222 522 aaPredicted RBP20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 SV2BQ7L1I2 683 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 TBC1D22AQ8WUA7 517 aa20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 MMTAG2Q9BU76 263 aaKnown RBP20.66■□□□□ 0.9
HERPUD2-201ENST00000311350 LRRC53A6NM62 1247 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 FXR2P51116 673 aaKnown RBP eCLIP20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 RRAGAQ7L523 313 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 RAPGEF5Q92565 580 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 NDST4Q9H3R1 872 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 ATP6V0A4Q9HBG4 840 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 ZNF277Q9NRM2 450 aaPredicted RBP20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 TSKSQ9UJT2 592 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 SNED1Q8TER0 1413 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 KLRF2D3W0D1 207 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 H0YGN5 161 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 FCER1AP12319 257 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 DYNLL2Q96FJ2 89 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 MMRN2Q9H8L6 949 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 RNF14Q9UBS8 474 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 NFS1Q9Y697 457 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 TAF1P21675 1872 aa20.65■□□□□ 0.9
HERPUD2-201ENST00000311350 SSU72P8A0A1W2PR75 194 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 USP17L3A6NCW0 530 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 USP17L4A6NCW7 530 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 GCOM1H8Y6P7 765 aaPredicted RBP20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 LDHBP07195 334 aaKnown RBP20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 MYZAPP0CAP1 466 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 RASA1P20936 1047 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 PSMD2Q13200 908 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 HLTFQ14527 1009 aaKnown RBP eCLIP20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 GRIPAP1Q4V328 841 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 HVCN1Q96D96 273 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 BAIAP2L1Q9UHR4 511 aa20.64■□□□□ 0.9
HERPUD2-201ENST00000311350 NAV1Q8NEY1 1877 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 SMCO2A6NFE2 343 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 MGRN1O60291 552 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 PALMO75781 387 aa20.64■□□□□ 0.89
HERPUD2-201ENST00000311350 LDHCP07864 332 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 325.4 ms