RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 DMP1Q13316 513 aaPredicted RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PPIL2Q13356 520 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MTMR1Q13613 665 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MCM6Q14566 821 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SLFN12LQ6IEE8 588 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MIGA2Q7L4E1 593 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 CEP57Q86XR8 500 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 HACE1Q8IYU2 909 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MYCT1Q8N699 235 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 OXER1Q8TDS5 423 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 GMLQ99445 158 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PLVAPQ9BX97 442 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MRPL44Q9H9J2 332 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MED4Q9NPJ6 270 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 LCMT1Q9UIC8 334 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TSKSQ9UJT2 592 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 KCNJ18B7U540 433 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ERCC3P19447 782 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TBC1D8BQ0IIM8 1120 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MYBPC2Q14324 1141 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 KCNJ12Q14500 433 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MAN2A1Q16706 1144 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 NT5DC1Q5TFE4 455 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ZNF746Q6NUN9 644 aaPredicted RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TAF4BQ92750 862 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SPAG5Q96R06 1193 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 UIMC1Q96RL1 719 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 RMDN3Q96TC7 470 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MXRA8Q9BRK3 442 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MLXIPQ9HAP2 919 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PARVGQ9HBI0 331 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ZNF215Q9UL58 517 aaPredicted RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 KIAA1024Q9UPX6 916 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 LRRC37AA6NMS7 1700 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 EIF3DO15371 548 aaKnown RBP eCLIP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ERLIN1O75477 346 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 EZRP15311 586 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 RPA1P27694 616 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 EPHX2P34913 555 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 NOLC1Q14978 699 aaKnown RBP eCLIP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 KARSQ15046 597 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 COBLL1Q53SF7 1204 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 C10orf76Q5T2E6 689 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SNRNP48Q6IEG0 339 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 CCDC186Q7Z3E2 898 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 NCAPG2Q86XI2 1143 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 FAM178BQ8IXR5 827 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ITFG2Q969R8 447 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MYO1AQ9UBC5 1043 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 G3BP2Q9UN86 482 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 A0A1W2PQC6 194 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MYO1CO00159 1063 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SLC16A3O15427 465 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 LDHAP00338 332 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 DSG3P32926 999 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 RANBP1P43487 201 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 INHBEP58166 350 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SREBF2Q12772 1141 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 ZSCAN26Q16670 478 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TPH2Q8IWU9 490 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TRMT44Q8IYL2 757 aaKnown RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SPICE1Q8N0Z3 855 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 PIAS4Q8N2W9 510 aaPredicted RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 SHCBP1Q8NEM2 672 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 MTMR8Q96EF0 704 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 BAG1Q99933 345 aaPredicted RBP6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TMEM39BQ9GZU3 492 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 C2orf40Q9H1Z8 148 aa6.58□□□□□ -1.36
SEC22A-201ENST00000309934 TESPA1A2RU30 521 aaPredicted RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 ZRANB2O95218 330 aaKnown RBP eCLIP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 FCER1AP12319 257 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 RFC5P40937 340 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 QARSP47897 775 aaKnown RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 AP3M2P53677 418 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SNW1Q13573 536 aaKnown RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 MTMR2Q13614 643 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 EDRF1Q3B7T1 1238 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 DDX12PQ92771 950 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 PDLIM2Q96JY6 352 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SCLT1Q96NL6 688 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 GOLPH3LQ9H4A5 285 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SENP2Q9HC62 589 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SLC45A1Q9Y2W3 748 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 ITIH6Q6UXX5 1313 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 NKRFO15226 690 aaKnown RBP eCLIP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 TGFB3P10600 412 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 SLC26A2P50443 739 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 DPYDQ12882 1025 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 UBE2SQ16763 222 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 C16orf87Q6PH81 154 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 PANX2Q96RD6 677 aa6.57□□□□□ -1.36
SEC22A-201ENST00000309934 ARMCX3Q9UH62 379 aaPredicted RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 ACTN4O43707 911 aaKnown RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 XRCC5P13010 732 aaKnown RBP6.57□□□□□ -1.36
SEC22A-201ENST00000309934 PSMC2P35998 433 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms