RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.37
PTPN2-201ENST00000309660 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 ATP8B1O43520 1251 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 EIF3JO75822 258 aaKnown RBP12.71□□□□□ -0.37
PTPN2-201ENST00000309660 FAM13AO94988 1023 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 LMAN1P49257 510 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 CASP4P49662 377 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 GMCL1P1Q8NEA9 526 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 GLIS2Q9BZE0 524 aaPredicted RBP12.71□□□□□ -0.37
PTPN2-201ENST00000309660 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 ZBTB21Q9ULJ3 1066 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 PACSIN2Q9UNF0 486 aaPredicted RBP12.71□□□□□ -0.37
PTPN2-201ENST00000309660 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
PTPN2-201ENST00000309660 FTCDO95954 541 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 EZH2Q15910 746 aaKnown RBP12.71□□□□□ -0.38
PTPN2-201ENST00000309660 ZC2HC1CQ53FD0 456 aaPredicted RBP12.71□□□□□ -0.38
PTPN2-201ENST00000309660 HYIQ5T013 277 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 TRIM59Q8IWR1 403 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 DYDC2Q96IM9 177 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 KCTD10Q9H3F6 313 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 CEP72Q9P209 647 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 RAB21Q9UL25 225 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 L1RE1Q9UN81 338 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 PCDHA2Q9Y5H9 948 aa12.71□□□□□ -0.38
PTPN2-201ENST00000309660 SCN9AQ15858 1988 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 TLR2O60603 784 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 GAS7O60861 476 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 ENTPD3O75355 529 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 XRCC5P13010 732 aaKnown RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 CYP3A7P24462 503 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 NMT1P30419 496 aaKnown RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 USP14P54578 494 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 KNOP1Q1ED39 458 aaKnown RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 KIAA0753Q2KHM9 967 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 TBC1D10BQ4KMP7 808 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 RDH13Q8NBN7 331 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 SH2D3AQ9BRG2 576 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 GCOM1H8Y6P7 765 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 NOL4O94818 638 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 GNA14O95837 355 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 CCDC70Q6NSX1 233 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 SYT2Q8N9I0 419 aaPredicted RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 IQCDQ96DY2 449 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 FAM20AQ96MK3 541 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 NOX5Q96PH1 765 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 SNX12Q9UMY4 172 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
PTPN2-201ENST00000309660 CDK17Q00537 523 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 ASIC2Q16515 512 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 MS4A14Q96JA4 679 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 PACSIN1Q9BY11 444 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
PTPN2-201ENST00000309660 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 BRWD3Q6RI45 1802 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 A0A087X0T9 212 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SPDYE2BA6NHP3 402 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-201ENST00000309660 FAM228BP0C875 321 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SPDYE6P0CI01 402 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 POLD1P28340 1107 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 NOP2P46087 812 aaKnown RBP12.69□□□□□ -0.38
PTPN2-201ENST00000309660 OSBPL9Q96SU4 736 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 WDR18Q9BV38 432 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 GOLPH3Q9H4A6 298 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 ZNF70Q9UC06 446 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-201ENST00000309660 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
PTPN2-201ENST00000309660 BCS1LQ9Y276 419 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SAMM50Q9Y512 469 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 MYH10P35580 1976 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 LRRC37AA6NMS7 1700 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 ABCB11O95342 1321 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 ANO9A1A5B4 782 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 AKAP3O75969 853 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SERPING1P05155 500 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 HNRNPH3P31942 346 aaKnown RBP12.69□□□□□ -0.38
PTPN2-201ENST00000309660 Q4G0T1 1027 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 GJB7Q6PEY0 223 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 HDAC7Q8WUI4 952 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 FAN1Q9Y2M0 1017 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
PTPN2-201ENST00000309660 NR3C1P04150 777 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 PAFAH1B1P43034 410 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 CYP2J2P51589 502 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 TUBB4BP68371 445 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 KCTD19Q17RG1 926 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 CALUO43852 315 aaPredicted RBP12.68□□□□□ -0.38
PTPN2-201ENST00000309660 MYBL2P10244 700 aa12.68□□□□□ -0.38
PTPN2-201ENST00000309660 KLRC1P26715 233 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms