RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CCPG1Q9ULG6 757 aa16.51■□□□□ 0.23
LEMD3-201ENST00000308330 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
LEMD3-201ENST00000308330 ARHGEF16Q5VV41 709 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 DENND2CQ68D51 928 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 SARM1Q6SZW1 724 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 FAM186BQ8IYM0 893 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 PSMB7Q99436 277 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 MLXIPQ9HAP2 919 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 UTP11Q9Y3A2 253 aaKnown RBP16.5■□□□□ 0.23
LEMD3-201ENST00000308330 UBXN1Q04323 297 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 KCTD2Q14681 263 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 ATL3Q6DD88 541 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 PRR5LQ6MZQ0 368 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 ANKRD23Q86SG2 305 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 DPP9Q86TI2 863 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 SIRT2Q8IXJ6 389 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 KLHL7Q8IXQ5 586 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 CDHR2Q9BYE9 1310 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 CYP2D7A0A087X1C5 515 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 MRPS9P82933 396 aaKnown RBP16.5■□□□□ 0.23
LEMD3-201ENST00000308330 DPH6Q7L8W6 267 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 TRIML2Q8N7C3 387 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 CCDC51Q96ER9 411 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 L2HGDHQ9H9P8 463 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 FSBPO95073 299 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 ZNF202O95125 648 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 CCNA1P78396 465 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 THOC7Q6I9Y2 204 aaKnown RBP16.5■□□□□ 0.23
LEMD3-201ENST00000308330 ZBED2Q9BTP6 218 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
LEMD3-201ENST00000308330 TECPR2O15040 1411 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 MCAMP43121 646 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 POLA2Q14181 598 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 CALCRLQ16602 461 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 DYNLL2Q96FJ2 89 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 SH3GLB1Q9Y371 365 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 KRT5P13647 590 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ARL1P40616 181 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 VSNL1P62760 191 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ZNF589Q86UQ0 364 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 FOXP4Q8IVH2 680 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 MAP4K1Q92918 833 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 RBM41Q96IZ5 413 aaKnown RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ECT2Q9H8V3 914 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ACTN4O43707 911 aaKnown RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 MYL1P05976 194 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 CYP21A2P08686 494 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 POLR2MP0CAP2 368 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ABL2P42684 1182 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 TPD52P55327 224 aaPredicted RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 GUCY1A3Q02108 690 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 ME3Q16798 604 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 HNRNPLLQ8WVV9 542 aaKnown RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 MTA3Q9BTC8 594 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 SETBP1Q9Y6X0 1596 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 GAS7O60861 476 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 TRPA1O75762 1119 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 TTLL1O95922 423 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 CRKP46108 304 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 RNASE9P60153 205 aaKnown RBP16.49■□□□□ 0.23
LEMD3-201ENST00000308330 HAUS4Q9H6D7 363 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
LEMD3-201ENST00000308330 CAPN1P07384 714 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 NYAP1Q6ZVC0 841 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 SP8Q8IXZ3 490 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 BBOF1Q8ND07 529 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 MSL3P1P0C860 447 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 KRT9P35527 623 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 MTTPP55157 894 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 MRPS15P82914 257 aaKnown RBP16.48■□□□□ 0.23
LEMD3-201ENST00000308330 LMNB2Q03252 620 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 C6orf118Q5T5N4 469 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 TBC1D5Q92609 795 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 ARHGAP42A6NI28 874 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 ARHGEF6Q15052 776 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.48■□□□□ 0.23
LEMD3-201ENST00000308330 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
LEMD3-201ENST00000308330 OMA1Q96E52 524 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 ANKRD27Q96NW4 1050 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 OSBPL3Q9H4L5 887 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 DNAAF2Q9NVR5 837 aaKnown RBP16.48■□□□□ 0.23
LEMD3-201ENST00000308330 DNM3Q9UQ16 869 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
LEMD3-201ENST00000308330 TRAF5O00463 557 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 NDC80O14777 642 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 PYGBP11216 843 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 RPL13P26373 211 aaKnown RBP16.47■□□□□ 0.23
LEMD3-201ENST00000308330 USP14P54578 494 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 AMNQ9BXJ7 453 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 DLC1Q96QB1 1528 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 KRT72Q14CN4 511 aa16.47■□□□□ 0.23
LEMD3-201ENST00000308330 BEND6Q5SZJ8 279 aaPredicted RBP16.47■□□□□ 0.23
LEMD3-201ENST00000308330 DACT3Q96B18 629 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms