RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 CA4P22748 312 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 EPHB4P54760 987 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 MFAP3P55082 362 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 ANKMY2Q8IV38 441 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 TEX2Q8IWB9 1127 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 CCDC87Q9NVE4 849 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 ADA2Q9NZK5 511 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 C1orf146Q5VVC0 180 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 ARHGAP27Q6ZUM4 889 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 SRRM1Q8IYB3 904 aaKnown RBP13.61□□□□□ -0.23
USP38-201ENST00000307017 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
USP38-201ENST00000307017 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
USP38-201ENST00000307017 VCAM1P19320 739 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 FGFR4P22455 802 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 RPS6P62753 249 aaKnown RBP13.61□□□□□ -0.23
USP38-201ENST00000307017 KRT33BQ14525 404 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 USP44Q9H0E7 712 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 RASGRF2O14827 1237 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
USP38-201ENST00000307017 KIF11P52732 1056 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 GANCQ8TET4 914 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 PYROXD1Q8WU10 500 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 MED4Q9NPJ6 270 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 TNRQ92752 1358 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 DIAPH2O60879 1101 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 SKOR1P84550 965 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 TMPRSS15P98073 1019 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 C1orf228Q6PIY5 440 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 P2RX5Q93086 422 aa13.61□□□□□ -0.23
USP38-201ENST00000307017 MROH5Q6ZUA9 1318 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 GTPBP10A4D1E9 387 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 SYCE1LA8MT33 242 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 GYG2O15488 501 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 E2F6O75461 281 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 LMNB1P20700 586 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 FLOT2Q14254 428 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 ACBD5Q5T8D3 534 aaPredicted RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 OLFML2BQ68BL8 750 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 CCDC124Q96CT7 223 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 ANKRD36BP1Q96IX9 119 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 FMO2Q99518 471 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.6□□□□□ -0.23
USP38-201ENST00000307017 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 ENO4A6NNW6 628 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 HSPA4LO95757 839 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 XPAP23025 273 aaPredicted RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 EIF4A1P60842 406 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 NIM1KQ8IY84 436 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 PAGE5Q96GU1 130 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 PRMT1Q99873 361 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 VPS11Q9H270 941 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 ZC4H2Q9NQZ6 224 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 EIF3CLB5ME19 914 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 RBBP7Q16576 425 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 EIF3CQ99613 913 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 TLK1Q9UKI8 766 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 MRC2Q9UBG0 1479 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 ESRRBO95718 433 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 HPS3Q969F9 1004 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 FAM161BQ96MY7 647 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 PCSK1NQ9UHG2 260 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 ADAMTS1Q9UHI8 967 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 LPXNO60711 386 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 TCN1P20061 433 aaPredicted RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 ALDH18A1P54886 795 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 PITPNM3Q9BZ71 974 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 HAUS2Q9NVX0 235 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 PSMC2P35998 433 aaKnown RBP13.6□□□□□ -0.23
USP38-201ENST00000307017 NT5C1BQ96P26 610 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 DNAJC5BQ9UF47 199 aa13.6□□□□□ -0.23
USP38-201ENST00000307017 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 ATP5JP18859 108 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 ESRRGP62508 458 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 DACH2Q96NX9 599 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 HAUS4Q9H6D7 363 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 MYL1P05976 194 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 PMLP29590 882 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 DNAJC24Q6P3W2 148 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 HAUS8Q9BT25 410 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 PGRMC1O00264 195 aaKnown RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 NEMP1O14524 444 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 BTKQ06187 659 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 DCAF4L1Q3SXM0 396 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
USP38-201ENST00000307017 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 KANSL2Q9H9L4 492 aa13.59□□□□□ -0.23
USP38-201ENST00000307017 ZFP69BQ9UJL9 534 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms