RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 AP1ARQ63HQ0 302 aa20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 DZIP3Q86Y13 1208 aaKnown RBP20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 ATXN2LQ8WWM7 1075 aaKnown RBP20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 PRMT1Q99873 361 aaKnown RBP20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 MMTAG2Q9BU76 263 aaKnown RBP20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.58■□□□□ 0.88
CHRNB1-201ENST00000306071 AFF2P51816 1311 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 PVALEFA0A1B0GWK0 134 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 SHBGP04278 402 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 PEX26Q7Z412 305 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 DNAAF5Q86Y56 855 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 GLIS3Q8NEA6 775 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 ACSBG1Q96GR2 724 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 KANSL2Q9H9L4 492 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 GGT7Q9UJ14 662 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 MTMR7Q9Y216 660 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 SMNDC1O75940 238 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 MIS18BP1Q6P0N0 1132 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 TRIM51Q9BSJ1 452 aa20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
CHRNB1-201ENST00000306071 PPFIA2O75334 1257 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 UBOX5O94941 541 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 STARD3NLO95772 234 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 IFNAR2P48551 515 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 ALDH5A1P51649 535 aaPredicted RBP20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 LRRC57Q8N9N7 239 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 PRCCQ92733 491 aaPredicted RBP20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 NSRP1Q9H0G5 558 aaKnown RBP20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 ECT2Q9H8V3 914 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 RIC8AQ9NPQ8 531 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 BTNL10A8MVZ5 291 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 CCND1P24385 295 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 PDE6BP35913 854 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 MMP13P45452 471 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 INHBEP58166 350 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 MTFR1LQ9H019 292 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 CD2APQ9Y5K6 639 aa20.56■□□□□ 0.88
CHRNB1-201ENST00000306071 CASZ1Q86V15 1759 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 EPS15P42566 896 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 FKBP3Q00688 224 aaKnown RBP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 GALNT17Q6IS24 598 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 DAAM2Q86T65 1068 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 DAGLBQ8NCG7 672 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 LARP4BQ92615 738 aaKnown RBP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 DDX17Q92841 729 aaKnown RBP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 AIPL1Q9NZN9 384 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 IGF2BP3O00425 579 aaKnown RBP eCLIP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 RGS16O15492 202 aaPredicted RBP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 ALADP13716 330 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 TXKP42681 527 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 MAP2K1Q02750 393 aaPredicted RBP20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 PTK2Q05397 1052 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 PROM2Q8N271 834 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 AZI2Q9H6S1 392 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 KCNMB3Q9NPA1 279 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 BLOC1S4Q9NUP1 217 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 SLC5A4Q9NY91 659 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 COL18A1P39060 1754 aa20.55■□□□□ 0.88
CHRNB1-201ENST00000306071 NCALDP61601 193 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 C10orf76Q5T2E6 689 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 DENND2CQ68D51 928 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 SEC14L1Q92503 715 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 ZBTB10Q96DT7 871 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 YIPF3Q9GZM5 350 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 ZMYND12Q9H0C1 365 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 ADAM7Q9H2U9 754 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 STK38LQ9Y2H1 464 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 CCDC169A6NNP5 214 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 RARAP10276 462 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 GRB10Q13322 594 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 TNS2Q63HR2 1409 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 MYOCDQ8IZQ8 938 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 SPICE1Q8N0Z3 855 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 PARD3BQ8TEW8 1205 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 HOMER3Q9NSC5 361 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 BARHL2Q9NY43 387 aa20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 CORO1CQ9ULV4 474 aaPredicted RBP20.54■□□□□ 0.88
CHRNB1-201ENST00000306071 GOLGA6L10A0A0M3HER8 536 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 STXBP3O00186 592 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 IFI35P80217 286 aaPredicted RBP20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 SLC4A8Q2Y0W8 1093 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 SPDYE1Q8NFV5 336 aaPredicted RBP20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 TPCN2Q8NHX9 752 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 NEK9Q8TD19 979 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 PGM2Q96G03 612 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 RAB17Q9H0T7 212 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 CCDC88AQ3V6T2 1871 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 A8MUI8 341 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 PMS2P54278 862 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 ADCY2Q08462 1091 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 ERICH1Q86X53 443 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 KLHL29Q96CT2 875 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 CCDC113Q9H0I3 377 aa20.53■□□□□ 0.88
CHRNB1-201ENST00000306071 STK17AQ9UEE5 414 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms