RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DDX39AO00148 427 aaKnown RBP30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 USP11P51784 963 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 IKBKEQ14164 716 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 GRIN2CQ14957 1233 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 DAGLBQ8NCG7 672 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 TCEAL9Q9UHQ7 104 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 TUBE1Q9UJT0 475 aa30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 YBX2Q9Y2T7 364 aaKnown RBP30.02■■■□□ 2.4
CDKN2A-201ENST00000304494 FOSL2P15408 326 aa30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 XBP1P17861 261 aa30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 WDR5P61964 334 aaKnown RBP30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 RPAINQ86UA6 219 aa30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 BLIDQ8IZY5 108 aa30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 TRPC6Q9Y210 931 aa30.01■■■□□ 2.39
CDKN2A-201ENST00000304494 KIF28PB7ZC32 967 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 DHX15O43143 795 aaKnown RBP30■■■□□ 2.39
CDKN2A-201ENST00000304494 SEC24BO95487 1268 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 CCNE2O96020 404 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 FAM160B1Q5W0V3 765 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 MIS18BP1Q6P0N0 1132 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 ABHD15Q6UXT9 468 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 RSPH3Q86UC2 560 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 HERC6Q8IVU3 1022 aa30■■■□□ 2.39
CDKN2A-201ENST00000304494 IGKV6D-21A0A0A0MT36 114 aa29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 MBLAC1A4D2B0 266 aaPredicted RBP29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 BACH1O14867 736 aa29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 RPLP2P05387 115 aaKnown RBP29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 CTSHP09668 335 aa29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 FAM26DQ5JW98 314 aa29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 ZNF746Q6NUN9 644 aaPredicted RBP29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 AIFM3Q96NN9 605 aa29.99■■■□□ 2.39
CDKN2A-201ENST00000304494 TET1Q8NFU7 2136 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 INSRRP14616 1297 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 NEK4P51957 841 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 IGBP1P78318 339 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 KRT76Q01546 638 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 PLCB4Q15147 1175 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 MARCH8Q5T0T0 291 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 PPP2R2DQ66LE6 453 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 SMAP1Q8IYB5 467 aaPredicted RBP29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 TBCKQ8TEA7 893 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 WASF1Q92558 559 aa29.98■■■□□ 2.39
CDKN2A-201ENST00000304494 GBF1Q92538 1859 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 POTEB3A0JP26 581 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 M0R2N6 131 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 MYOGP15173 224 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 PLEKHG4Q58EX7 1191 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 POTEBQ6S5H4 581 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 RUFY4Q6ZNE9 571 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 SEPT8Q92599 483 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 LENG9Q96B70 501 aa29.97■■■□□ 2.39
CDKN2A-201ENST00000304494 TCTN1Q2MV58 587 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 SLC17A8Q8NDX2 589 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 DBF4BQ8NFT6 615 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 UIMC1Q96RL1 719 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 GAS2L1Q99501 681 aaPredicted RBP29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 PHF20Q9BVI0 1012 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 ZNF302Q9NR11 478 aa29.96■■■□□ 2.39
CDKN2A-201ENST00000304494 KAT6AQ92794 2004 aa29.95■■■□□ 2.39
CDKN2A-201ENST00000304494 NPY5RQ15761 445 aa29.95■■■□□ 2.39
CDKN2A-201ENST00000304494 ME3Q16798 604 aa29.95■■■□□ 2.39
CDKN2A-201ENST00000304494 MAFAQ8NHW3 353 aaPredicted RBP29.95■■■□□ 2.39
CDKN2A-201ENST00000304494 GTF3C6Q969F1 213 aa29.95■■■□□ 2.39
CDKN2A-201ENST00000304494 TLL1O43897 1013 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 CTDNEP1O95476 244 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 CA3P07451 260 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 DEFB103AP81534 67 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 NONOQ15233 471 aaKnown RBP eCLIP29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 SWSAP1Q6NVH7 229 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 PDXDC2PQ6P474 469 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 KRT25Q7Z3Z0 450 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 CCDC60Q8IWA6 550 aaPredicted RBP29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 APBB2Q92870 758 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 RIT2Q99578 217 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 ZBED2Q9BTP6 218 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 PRDM12Q9H4Q4 367 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 ORC3Q9UBD5 711 aaPredicted RBP29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 KCNJ14Q9UNX9 436 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 PCDHA10Q9Y5I2 948 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 CHD9Q3L8U1 2897 aa29.94■■■□□ 2.38
CDKN2A-201ENST00000304494 MSH4O15457 936 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 EDIL3O43854 480 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 HBP1O60381 514 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 PSAPP07602 524 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 Q4G0T1 1027 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 ATP8B4Q8TF62 1192 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 DNAJB3Q8WWF6 145 aa29.93■■■□□ 2.38
CDKN2A-201ENST00000304494 CYP3A7-CYP3A51PA0A087WV96 503 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 CHRNA1P02708 482 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 AMHP03971 560 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 CYP3A7P24462 503 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 MOXD1Q6UVY6 613 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 NECAB1Q8N987 351 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 SAMM50Q9Y512 469 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 PCDHA2Q9Y5H9 948 aa29.92■■■□□ 2.38
CDKN2A-201ENST00000304494 COL1A2P08123 1366 aa29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 WDR64B1ANS9 1081 aa29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 GAS7O60861 476 aa29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 LARGE1O95461 756 aa29.91■■■□□ 2.38
CDKN2A-201ENST00000304494 MGAT3Q09327 533 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms