RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 NFIL3Q16649 462 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 KNOP1Q1ED39 458 aaKnown RBP21.47■■□□□ 1.03
HOXC4-201ENST00000303406 ZNF662Q6ZS27 426 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 TPH2Q8IWU9 490 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 CCDC170Q8IYT3 715 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 TRERF1Q96PN7 1200 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 KCNH7Q9NS40 1196 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 TBC1D22BQ9NU19 505 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 TBC1D7Q9P0N9 293 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 MYO1AQ9UBC5 1043 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 SBF1O95248 1867 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 LYPLA2O95372 231 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 ZNF131P52739 623 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 RPS6P62753 249 aaKnown RBP21.46■■□□□ 1.03
HOXC4-201ENST00000303406 CCDC40Q4G0X9 1142 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 TRIM59Q8IWR1 403 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 ANKRD7Q92527 254 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 ZKSCAN4Q969J2 545 aaPredicted RBP21.46■■□□□ 1.03
HOXC4-201ENST00000303406 ATG4CQ96DT6 458 aa21.46■■□□□ 1.03
HOXC4-201ENST00000303406 EPN1Q9Y6I3 576 aaPredicted RBP21.46■■□□□ 1.03
HOXC4-201ENST00000303406 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 CHMP2AO43633 222 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 NDUFA10O95299 355 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 GUCY2CP25092 1073 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 CASQ1P31415 396 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 GNG11P61952 73 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 MRPS9P82933 396 aaKnown RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 DGKZQ13574 1117 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 PGM5Q15124 567 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 SH3D19Q5HYK7 790 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 WDR59Q6PJI9 974 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 RNF207Q6ZRF8 634 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 NELFCDQ8IXH7 590 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 IL31RAQ8NI17 732 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 EEF2KMTQ96G04 330 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 PCMTD1Q96MG8 357 aaPredicted RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 ZHX3Q9H4I2 956 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 TYW1Q9NV66 732 aaKnown RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 KIF5CO60282 957 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 FAM13AO94988 1023 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 P4HBP07237 508 aaKnown RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 CYLC1P35663 651 aaPredicted RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 HIRAP54198 1017 aaPredicted RBP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 RAD51AP2Q09MP3 1159 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 ADAM9Q13443 819 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 COG2Q14746 738 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 CATSPERGQ6ZRH7 1159 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 MIER3Q7Z3K6 550 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 FRMD5Q7Z6J6 570 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.45■■□□□ 1.02
HOXC4-201ENST00000303406 TAAR1Q96RJ0 339 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 PDCD2LQ9BRP1 358 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 LXNQ9BS40 222 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 PXMP2Q9NR77 195 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 RNF146Q9NTX7 359 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 TMOD4Q9NZQ9 345 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 ZHX2Q9Y6X8 837 aa21.45■■□□□ 1.02
HOXC4-201ENST00000303406 LOC285556D6RIA3 1793 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 SLC16A3O15427 465 aaKnown RBP21.44■■□□□ 1.02
HOXC4-201ENST00000303406 STXBP4Q6ZWJ1 553 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 CHP1Q99653 195 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 ZSWIM4Q9H7M6 989 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 PARVGQ9HBI0 331 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 SPON1Q9HCB6 807 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 AGPAT5Q9NUQ2 364 aa21.44■■□□□ 1.02
HOXC4-201ENST00000303406 DBR1Q9UK59 544 aaKnown RBP21.44■■□□□ 1.02
HOXC4-201ENST00000303406 PAPPA2Q9BXP8 1791 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 NKRFO15226 690 aaKnown RBP eCLIP21.43■■□□□ 1.02
HOXC4-201ENST00000303406 RPL13P26373 211 aaKnown RBP21.43■■□□□ 1.02
HOXC4-201ENST00000303406 EPS15P42566 896 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 KLK7P49862 253 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 CASP5P51878 434 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 KRT83P78385 493 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 MTMR1Q13613 665 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 TUBB2AQ13885 445 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 RDM1Q8NG50 284 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
HOXC4-201ENST00000303406 PIGOQ8TEQ8 1089 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 TUBB2BQ9BVA1 445 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 NUCKS1Q9H1E3 243 aaKnown RBP21.43■■□□□ 1.02
HOXC4-201ENST00000303406 ZNF215Q9UL58 517 aaPredicted RBP21.43■■□□□ 1.02
HOXC4-201ENST00000303406 PLAGL2Q9UPG8 496 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 AFG3L2Q9Y4W6 797 aa21.43■■□□□ 1.02
HOXC4-201ENST00000303406 RSPH10B2B2RC85 870 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 EIF3CLB5ME19 914 aaKnown RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 MAFGO15525 162 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 RSPH10BP0C881 870 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 MYBP10242 640 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 HOXD13P35453 343 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 HMGCS2P54868 508 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 NCBP1Q09161 790 aaKnown RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ITGB3BPQ13352 177 aaPredicted RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ARHGAP29Q52LW3 1261 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ZNF710Q8N1W2 664 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 ACRBPQ8NEB7 543 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 RMDN3Q96TC7 470 aa21.42■■□□□ 1.02
HOXC4-201ENST00000303406 EIF3CQ99613 913 aaKnown RBP21.42■■□□□ 1.02
HOXC4-201ENST00000303406 TIPINQ9BVW5 301 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms