RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 BAG1Q99933 345 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 ZSWIM4Q9H7M6 989 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 GNPTABQ3T906 1256 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 CCDC40Q4G0X9 1142 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 GLIS3Q8NEA6 775 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 RUSC1Q9BVN2 902 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 CYP39A1Q9NYL5 469 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 SPDYE5A6NIY4 337 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 RINT1Q6NUQ1 792 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 IRF2BP1Q8IU81 584 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 CNGA4Q8IV77 575 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 OPTNQ96CV9 577 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 POLD4Q9HCU8 107 aa16.07■□□□□ 0.16
SHCBP1-201ENST00000303383 GCNT3O95395 438 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 DNM2P50570 870 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 EHHADHQ08426 723 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 TBC1D8BQ0IIM8 1120 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 TRIM14Q14142 442 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 SLC10A4Q96EP9 437 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 LGALS16A8MUM7 142 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 B4DLN1 442 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 CCP110O43303 1012 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 GAP43P17677 238 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 FKBP3Q00688 224 aaKnown RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 KRT76Q01546 638 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 RBL2Q08999 1139 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 ITGB3BPQ13352 177 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 WDR78Q5VTH9 848 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 VSIG10LQ86VR7 867 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 CDHR1Q96JP9 859 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 FRMPD4Q14CM0 1322 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 A0A0G2JLL6 359 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 TBX2Q13207 712 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 PPIL2Q13356 520 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 LBX2Q6XYB7 198 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 FASTKD5Q7L8L6 764 aaKnown RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 PRRT2Q7Z6L0 340 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 GPRASP2Q96D09 838 aa16.06■□□□□ 0.16
SHCBP1-201ENST00000303383 COL11A1P12107 1806 aaPredicted RBP16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 WDR64B1ANS9 1081 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 OSBPP22059 807 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 QARSP47897 775 aaKnown RBP16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 JAK3P52333 1124 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 SFI1A8K8P3 1242 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 ZBTB39O15060 712 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 MAFGO15525 162 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 CASP14P31944 242 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 SP4Q02446 784 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 STXBP4Q6ZWJ1 553 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 ITIH6Q6UXX5 1313 aa16.05■□□□□ 0.16
SHCBP1-201ENST00000303383 RSPH10B2B2RC85 870 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 ARHGAP6O43182 974 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 RSPH10BP0C881 870 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 SFNP31947 248 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 ERCC3P19447 782 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 PTPN14Q15678 1187 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 TC2NQ8N9U0 490 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 SPATC1LQ9H0A9 340 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 AGTPBP1Q9UPW5 1226 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 PFASO15067 1338 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 POTEB2H3BUK9 544 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 TNNT1P13805 278 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 TRIM21P19474 475 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 HERVK_113P62684 666 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 STXBP2Q15833 593 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 MAP1SQ66K74 1059 aaPredicted RBP16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 ZNF592Q92610 1267 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 KCND2Q9NZV8 630 aa16.04■□□□□ 0.16
SHCBP1-201ENST00000303383 FRMD3A2A2Y4 597 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 CETN3O15182 167 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 DHX15O43143 795 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 STX10O60499 249 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 ATP9AO75110 1047 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 MAEAQ7L5Y9 396 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 SCFD1Q8WVM8 642 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 BTBD7Q9P203 1132 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PEX10O60683 326 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PBX1P40424 430 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 FAM178BQ8IXR5 827 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 FGFBP2Q9BYJ0 223 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 STAM2O75886 525 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PADI6Q6TGC4 694 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PPP4R3CPQ6ZMV5 832 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PANX2Q96RD6 677 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 MPHOSPH6Q99547 160 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 MAF1Q9H063 256 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 PARP14Q460N5 1801 aa16.03■□□□□ 0.16
SHCBP1-201ENST00000303383 ZSCAN12O43309 604 aa16.02■□□□□ 0.16
SHCBP1-201ENST00000303383 MFAP3LO75121 409 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms