RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
CHAF1A-201ENST00000301280 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
CHAF1A-201ENST00000301280 LRRC1Q9BTT6 524 aa17.16■□□□□ 0.34
CHAF1A-201ENST00000301280 CUEDC2Q9H467 287 aa17.16■□□□□ 0.34
CHAF1A-201ENST00000301280 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
CHAF1A-201ENST00000301280 ABCB11O95342 1321 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 KCNH2Q12809 1159 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 DMGDHQ9UI17 866 aaKnown RBP17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 LRRIQ3A6PVS8 624 aaPredicted RBP17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 TRIM66O15016 1216 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 PAFAH1B1P43034 410 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 TUBB2AQ13885 445 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 CCDC70Q6NSX1 233 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 TUBB2BQ9BVA1 445 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 AP1M1Q9BXS5 423 aa17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 COL11A2P13942 1736 aaPredicted RBP17.15■□□□□ 0.34
CHAF1A-201ENST00000301280 A0A1W2PQC6 194 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 KLRG2A4D1S0 409 aaPredicted RBP17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 MAP2K7O14733 419 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 GAS7O60861 476 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 GFPT2O94808 682 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 POLD1P28340 1107 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 LRCH2Q5VUJ6 765 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 HDXQ7Z353 690 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 ALS2CR12Q96Q35 445 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 ARMCX3Q9UH62 379 aaPredicted RBP17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 RSPH14Q9UHP6 348 aa17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 ATF5Q9Y2D1 282 aaPredicted RBP17.14■□□□□ 0.34
CHAF1A-201ENST00000301280 ESYT2A0FGR8 921 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 FGFR1OPO95684 399 aaKnown RBP17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 ADRA2BP18089 450 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 CYP11B2P19099 503 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 EIF2AK2P19525 551 aaKnown RBP17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 GABPAQ06546 454 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 SLC9C1Q4G0N8 1177 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 U2AF1L4Q8WU68 220 aaKnown RBP17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 RUFY1Q96T51 708 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 PRR12Q9ULL5 1215 aa17.14■□□□□ 0.33
CHAF1A-201ENST00000301280 KCNK3O14649 394 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 PALMO75781 387 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 SCFD1Q8WVM8 642 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 A0A087X0T9 212 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 CEP104O60308 925 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 ONECUT3O60422 494 aaPredicted RBP17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 FAM228BP0C875 321 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 COPB2P35606 906 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 ATP1A2P50993 1020 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 MSL3Q8N5Y2 521 aaKnown RBP17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 ERMNQ8TAM6 284 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 TTYH3Q9C0H2 523 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 BRWD3Q6RI45 1802 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 MYH10P35580 1976 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 SMIM23A6NLE4 172 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 KIAA1755Q5JYT7 1200 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 BEND6Q5SZJ8 279 aaPredicted RBP17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 PPP1R18Q6NYC8 613 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 MYO1AQ9UBC5 1043 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 STK17AQ9UEE5 414 aa17.13■□□□□ 0.33
CHAF1A-201ENST00000301280 EIF3JO75822 258 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 KLRC1P26715 233 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 TRADDQ15628 312 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 ODR4Q5SWX8 454 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 ZNF746Q6NUN9 644 aaPredicted RBP17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 FOXR2Q6PJQ5 311 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 UHMK1Q8TAS1 419 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 KRT12Q99456 494 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 DNAJC7Q99615 494 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 MEIS2O14770 477 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 MSH4O15457 936 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 VAV2P52735 878 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 ASIC2Q16515 512 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 ZSCAN26Q16670 478 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 PODNQ7Z5L7 613 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 GUF1Q8N442 669 aaKnown RBP17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 SWAP70Q9UH65 585 aa17.12■□□□□ 0.33
CHAF1A-201ENST00000301280 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 CCDC151A5D8V7 595 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 hCG_1984214I3L0E3 225 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 ZEB2O60315 1214 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 XRCC5P13010 732 aaKnown RBP17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 STAT2P52630 851 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 GUCY2DQ02846 1103 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 WHAMMP3Q1A5X7 153 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
CHAF1A-201ENST00000301280 ZNF713Q8N859 430 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms