RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 PIGSQ96S52 555 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 MYH7P12883 1935 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 PVALEFA0A1B0GWK0 134 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 ENO4A6NNW6 628 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 TDP2O95551 362 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 ANP32DO95626 131 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 PRPHP41219 470 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 USP11P51784 963 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 ELF3P78545 371 aaPredicted RBP12.43□□□□□ -0.42
TRUB1-201ENST00000298746 SATB1Q01826 763 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 KCNH2Q12809 1159 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 GALNT17Q6IS24 598 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 C6orf89Q6UWU4 347 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 NEK9Q8TD19 979 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 KCNV2Q8TDN2 545 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 COA7Q96BR5 231 aa12.43□□□□□ -0.42
TRUB1-201ENST00000298746 MARF1Q9Y4F3 1742 aaKnown RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 CCDC188H7C350 402 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 STXBP3O00186 592 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 SLC9A1P19634 815 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 AGBL2Q5U5Z8 902 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 TGFBRAP1Q8WUH2 860 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 GLG1Q92896 1179 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 ATP8A2Q9NTI2 1148 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 STK17AQ9UEE5 414 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 ARMCX3Q9UH62 379 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 SLC12A6Q9UHW9 1150 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 ORC4O43929 436 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 COASYQ13057 564 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 GPBP1Q86WP2 473 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 EDEM3Q9BZQ6 932 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 ATP6V0A4Q9HBG4 840 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 MTRF1LQ9UGC7 380 aaKnown RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 RASAL2Q9UJF2 1139 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 C21orf2O43822 256 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 GFPT2O94808 682 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 DR1Q01658 176 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 GRB10Q13322 594 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 YIPF3Q9GZM5 350 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 NOP53Q9NZM5 478 aaKnown RBP12.42□□□□□ -0.42
TRUB1-201ENST00000298746 GGA2Q9UJY4 613 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 KIAA1024Q9UPX6 916 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 PCDHGC5Q9Y5F6 944 aa12.42□□□□□ -0.42
TRUB1-201ENST00000298746 LCA5LO95447 670 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 BIRC2Q13490 618 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 TMC3Q7Z5M5 1100 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 DGKHQ86XP1 1220 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 SYCE1Q8N0S2 351 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 TMEM47Q9BQJ4 181 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 GPCPD1Q9NPB8 672 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 PTPN22Q9Y2R2 807 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 RGPD5Q99666 1765 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 TMEM94Q12767 1356 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 F8VZ95 297 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 CYTH3O43739 400 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 CYP19A1P11511 503 aaPredicted RBP12.41□□□□□ -0.42
TRUB1-201ENST00000298746 XRCC5P13010 732 aaKnown RBP12.41□□□□□ -0.42
TRUB1-201ENST00000298746 HIBADHP31937 336 aaKnown RBP12.41□□□□□ -0.42
TRUB1-201ENST00000298746 ATP11AP98196 1134 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 RCSD1Q6JBY9 416 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 RAD54LQ92698 747 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 P3H4Q92791 437 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 NUDT12Q9BQG2 462 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 HDAC9Q9UKV0 1011 aa12.41□□□□□ -0.42
TRUB1-201ENST00000298746 AKAP11Q9UKA4 1901 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 E9PMD0 336 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 DRD4P21917 467 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 PMS2P54278 862 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 FAM228AQ86W67 206 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 BLOC1S4Q9NUP1 217 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 SPATS2LQ9NUQ6 558 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 PCDHA12Q9UN75 941 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 FLT1P17948 1338 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 GRM4Q14833 912 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 WLSQ5T9L3 541 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 MAEAQ7L5Y9 396 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 DBR1Q9UK59 544 aaKnown RBP12.4□□□□□ -0.42
TRUB1-201ENST00000298746 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.42
TRUB1-201ENST00000298746 GNA14O95837 355 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms