RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NFRKBQ6P4R8 1299 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 NELFCDQ8IXH7 590 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 CCDC170Q8IYT3 715 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 RETREG2Q8NC44 543 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 TBC1D16Q8TBP0 767 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
UBAP1-201ENST00000297661 SALL4Q9UJQ4 1053 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.1■□□□□ 0.33
UBAP1-201ENST00000297661 ARHGAP27Q6ZUM4 889 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 ZNF572Q7Z3I7 529 aaPredicted RBP17.1■□□□□ 0.33
UBAP1-201ENST00000297661 PARP9Q8IXQ6 854 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 RAD54LQ92698 747 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 CDK5RAP2Q96SN8 1893 aa17.1■□□□□ 0.33
UBAP1-201ENST00000297661 FAM196BA6NMK8 535 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 BUB1O43683 1085 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 IL1R1P14778 569 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 CRYMQ14894 314 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 KRT79Q5XKE5 535 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 CYB5D1Q6P9G0 228 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 C6orf89Q6UWU4 347 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 FAM228AQ86W67 206 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 IQCKQ8N0W5 287 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 TBC1D22AQ8WUA7 517 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 JMJD4Q9H9V9 463 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 SLC24A3Q9HC58 644 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 USP17L10C9JJH3 530 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 E7EVH7 732 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 FAM107AO95990 144 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 MDH1P40925 334 aaKnown RBP17.09■□□□□ 0.33
UBAP1-201ENST00000297661 ARID5AQ03989 594 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 DRP2Q13474 957 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 CCDC121Q6ZUS5 278 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 GGA2Q9UJY4 613 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 PLAGL2Q9UPG8 496 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 MYH10P35580 1976 aa17.09■□□□□ 0.33
UBAP1-201ENST00000297661 EMC10Q5UCC4 262 aa17.08■□□□□ 0.33
UBAP1-201ENST00000297661 LRRC55Q6ZSA7 311 aa17.08■□□□□ 0.33
UBAP1-201ENST00000297661 FUKQ8N0W3 1084 aa17.08■□□□□ 0.33
UBAP1-201ENST00000297661 TRIM58Q8NG06 486 aa17.08■□□□□ 0.33
UBAP1-201ENST00000297661 SCLT1Q96NL6 688 aa17.08■□□□□ 0.33
UBAP1-201ENST00000297661 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.33
UBAP1-201ENST00000297661 DDX25Q9UHL0 483 aaKnown RBP17.08■□□□□ 0.33
UBAP1-201ENST00000297661 GOLGA6L7A0A1B0GV03 622 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L15C9J2P7 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L13C9JLJ4 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L11C9JVI0 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L18D6R9N7 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L22D6RA61 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L17D6RBQ6 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L19D6RCP7 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L20D6RJB6 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 E9PMD0 336 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 BBOX1O75936 387 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 EZRP15311 586 aaKnown RBP17.08■□□□□ 0.32
UBAP1-201ENST00000297661 PLCG2P16885 1265 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
UBAP1-201ENST00000297661 CLNS1AP54105 237 aaKnown RBP17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L24Q0WX57 530 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 MAN2A1Q16706 1144 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 C8orf74Q6P047 294 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 USP17L6PQ6QN14 398 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 HAS1Q92839 578 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 ZHX3Q9H4I2 956 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
UBAP1-201ENST00000297661 FRMD3A2A2Y4 597 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TRAF5O00463 557 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TNFRSF8P28908 595 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 SNAP25P60880 206 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 E2F5Q15329 346 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 CACNA2D4Q7Z3S7 1137 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 OSBPL9Q96SU4 736 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TACC1O75410 805 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 FAM153BP0C7A2 387 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TAL1P17542 331 aaPredicted RBP17.07■□□□□ 0.32
UBAP1-201ENST00000297661 STAT3P40763 770 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 SLC1A4P43007 532 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 CACNB3P54284 484 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 KCTD19Q17RG1 926 aaPredicted RBP17.07■□□□□ 0.32
UBAP1-201ENST00000297661 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 FAM153CQ494X1 144 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TDRD12Q587J7 1177 aaKnown RBP17.07■□□□□ 0.32
UBAP1-201ENST00000297661 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 FAM153AQ9UHL3 310 aa17.07■□□□□ 0.32
UBAP1-201ENST00000297661 TPX2Q9ULW0 747 aaKnown RBP17.07■□□□□ 0.32
UBAP1-201ENST00000297661 A0A1W2PQJ5 194 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 COASYQ13057 564 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 FMNL3Q8IVF7 1028 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 GUF1Q8N442 669 aaKnown RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 CYFIP2Q96F07 1278 aa17.06■□□□□ 0.32
UBAP1-201ENST00000297661 TRIM6Q9C030 488 aaPredicted RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 PPANQ9NQ55 473 aaKnown RBP17.06■□□□□ 0.32
UBAP1-201ENST00000297661 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms