RNA–Protein interactions for RNA: ENST00000296444.6

SHISA5-201, Transcript of shisa family member 5, humanhuman

TSL 1 (best) BASIC

Gene SHISA5, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-201ENST00000296444 NCAPG2Q86XI2 1143 aa26.79■■□□□ 1.88
SHISA5-201ENST00000296444 NELFCDQ8IXH7 590 aa26.79■■□□□ 1.88
SHISA5-201ENST00000296444 MOV10L1Q9BXT6 1211 aaKnown RBP26.79■■□□□ 1.88
SHISA5-201ENST00000296444 PSMA7O14818 248 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 IRX3P78415 501 aaPredicted RBP26.78■■□□□ 1.88
SHISA5-201ENST00000296444 SP4Q02446 784 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 PPIL2Q13356 520 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 RINT1Q6NUQ1 792 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 SPATC1LQ9H0A9 340 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 RABGAP1Q9Y3P9 1069 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 CXCL11O14625 94 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 CCNE1P24864 410 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 KCNA1Q09470 495 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 BMP2KQ9NSY1 1161 aaPredicted RBP26.78■■□□□ 1.88
SHISA5-201ENST00000296444 SAMM50Q9Y512 469 aa26.78■■□□□ 1.88
SHISA5-201ENST00000296444 RNF225M0QZC1 329 aaPredicted RBP26.77■■□□□ 1.88
SHISA5-201ENST00000296444 PGK2P07205 417 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 ADKP55263 362 aaKnown RBP26.77■■□□□ 1.88
SHISA5-201ENST00000296444 ARMC9Q7Z3E5 817 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 TEX2Q8IWB9 1127 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 ANKRD35Q8N283 1001 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 PROCA1Q8NCQ7 364 aaPredicted RBP26.77■■□□□ 1.88
SHISA5-201ENST00000296444 SLC10A4Q96EP9 437 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 RIT2Q99578 217 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 KRT18P05783 430 aaKnown RBP26.77■■□□□ 1.88
SHISA5-201ENST00000296444 MAEAQ7L5Y9 396 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 CSGALNACT2Q8N6G5 542 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 MAP3K20Q9NYL2 800 aaKnown RBP26.77■■□□□ 1.88
SHISA5-201ENST00000296444 AGTPBP1Q9UPW5 1226 aa26.77■■□□□ 1.88
SHISA5-201ENST00000296444 KIAA1217Q5T5P2 1943 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 GABPB1Q06547 395 aaPredicted RBP26.76■■□□□ 1.87
SHISA5-201ENST00000296444 CENPPQ6IPU0 288 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 MIER3Q7Z3K6 550 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 KSR1Q8IVT5 923 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 DHTKD1Q96HY7 919 aaPredicted RBP26.76■■□□□ 1.87
SHISA5-201ENST00000296444 EYA4O95677 639 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 HOXD13P35453 343 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 EPHA7Q15375 998 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 FAM26FQ5R3K3 315 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 SFR1Q86XK3 245 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 NSUN6Q8TEA1 469 aaKnown RBP26.76■■□□□ 1.87
SHISA5-201ENST00000296444 SCFD1Q8WVM8 642 aa26.76■■□□□ 1.87
SHISA5-201ENST00000296444 ZC3H4Q9UPT8 1303 aaKnown RBP26.75■■□□□ 1.87
SHISA5-201ENST00000296444 SPDYE4A6NLX3 237 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 USP27XA6NNY8 438 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 CEP350Q5VT06 3117 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 MYPNQ86TC9 1320 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 FRMD3A2A2Y4 597 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 SOWAHBA6NEL2 793 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 LRRC10BA6NIK2 292 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 C1orf186Q6ZWK4 172 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 CPLX3Q8WVH0 158 aa26.75■■□□□ 1.87
SHISA5-201ENST00000296444 LIMA1Q9UHB6 759 aaKnown RBP26.75■■□□□ 1.87
SHISA5-201ENST00000296444 LOC285556D6RIA3 1793 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 MYBP10242 640 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 SKILP12757 684 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 PBX1P40424 430 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 COPB1P53618 953 aaKnown RBP26.74■■□□□ 1.87
SHISA5-201ENST00000296444 TBX2Q13207 712 aaPredicted RBP26.74■■□□□ 1.87
SHISA5-201ENST00000296444 EEPD1Q7L9B9 569 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 INPP4AQ96PE3 977 aaPredicted RBP26.74■■□□□ 1.87
SHISA5-201ENST00000296444 TUFT1Q9NNX1 390 aa26.74■■□□□ 1.87
SHISA5-201ENST00000296444 CGNQ9P2M7 1197 aaKnown RBP26.74■■□□□ 1.87
SHISA5-201ENST00000296444 STIM1Q13586 685 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 NIPA1Q7RTP0 329 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 RIOX2Q8IUF8 465 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 CBFA2T2O43439 604 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 CCND2P30279 289 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 NCBP1Q09161 790 aaKnown RBP26.73■■□□□ 1.87
SHISA5-201ENST00000296444 CCDC47Q96A33 483 aaKnown RBP26.73■■□□□ 1.87
SHISA5-201ENST00000296444 MS4A4AQ96JQ5 239 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 PAXBP1Q9Y5B6 917 aa26.73■■□□□ 1.87
SHISA5-201ENST00000296444 ECM2O94769 699 aaPredicted RBP26.72■■□□□ 1.87
SHISA5-201ENST00000296444 KCNA2P16389 499 aa26.72■■□□□ 1.87
SHISA5-201ENST00000296444 PORCNQ9H237 461 aa26.72■■□□□ 1.87
SHISA5-201ENST00000296444 N4BP3O15049 544 aa26.72■■□□□ 1.87
SHISA5-201ENST00000296444 TMEM63BQ5T3F8 832 aa26.72■■□□□ 1.87
SHISA5-201ENST00000296444 CST9Q5W186 159 aa26.72■■□□□ 1.87
SHISA5-201ENST00000296444 GUF1Q8N442 669 aaKnown RBP26.72■■□□□ 1.87
SHISA5-201ENST00000296444 PRPF6O94906 941 aaKnown RBP26.71■■□□□ 1.87
SHISA5-201ENST00000296444 CELF2O95319 508 aaKnown RBP26.71■■□□□ 1.87
SHISA5-201ENST00000296444 KLK7P49862 253 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 NPEPPSP55786 919 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 ZC2HC1CQ53FD0 456 aaPredicted RBP26.71■■□□□ 1.87
SHISA5-201ENST00000296444 PLA2G4FQ68DD2 849 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 SPECC1LQ69YQ0 1117 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 CCDC65Q8IXS2 484 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 FGD4Q96M96 766 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 IMPACTQ9P2X3 320 aa26.71■■□□□ 1.87
SHISA5-201ENST00000296444 NMT1P30419 496 aaKnown RBP26.7■■□□□ 1.87
SHISA5-201ENST00000296444 SEPT14Q6ZU15 432 aa26.7■■□□□ 1.87
SHISA5-201ENST00000296444 MYOCDQ8IZQ8 938 aa26.7■■□□□ 1.87
SHISA5-201ENST00000296444 RBL2Q08999 1139 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 ZCWPW2Q504Y3 356 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 COBLL1Q53SF7 1204 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 DAW1Q8N136 415 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 SAMD3Q8N6K7 520 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 TC2NQ8N9U0 490 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 CHST13Q8NET6 341 aa26.7■■□□□ 1.86
SHISA5-201ENST00000296444 CNOT6LQ96LI5 555 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms