RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 FDX1P10109 184 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 STAT3P40763 770 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 KRT83P78385 493 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 RASA3Q14644 834 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 MTF1Q14872 753 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 MEA1Q16626 185 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 KIF4BQ2VIQ3 1234 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 EDRF1Q3B7T1 1238 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 NBPF9Q3BBW0 867 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ARHGAP29Q52LW3 1261 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 HERC4Q5GLZ8 1057 aaPredicted RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CCDC174Q6PII3 467 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 LDHDQ86WU2 507 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 MCF2L2Q86YR7 1114 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CCDC170Q8IYT3 715 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 PDCL2Q8N4E4 241 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 PRPF38AQ8NAV1 312 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 TSC1Q92574 1164 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 GJA10Q969M2 543 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 DESI2Q9BSY9 194 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 KIAA1683Q9H0B3 1180 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 NDST4Q9H3R1 872 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 SLC24A3Q9HC58 644 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 VAV3Q9UKW4 847 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 PCDHA2Q9Y5H9 948 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CD2APQ9Y5K6 639 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 DICER1Q9UPY3 1922 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 TRAF5O00463 557 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ICAM1P05362 532 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 GAP43P17677 238 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CYLC1P35663 651 aaPredicted RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ERVK-24P63145 666 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 TUBB4BP68371 445 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ZCWPW2Q504Y3 356 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CEP55Q53EZ4 464 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ARSHQ5FYA8 562 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 LRCH2Q5VUJ6 765 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ZNF662Q6ZS27 426 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 LRRC55Q6ZSA7 311 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 OTOP1Q7RTM1 612 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 NIPA1Q7RTP0 329 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 MNS1Q8NEH6 495 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 SLC5A5Q92911 643 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 EIF2AK1Q9BQI3 630 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 ZNF341Q9BYN7 854 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 TTYH3Q9C0H2 523 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 MRPL44Q9H9J2 332 aaKnown RBP10.24□□□□□ -0.77
CLRN1-201ENST00000295911 CDHR5Q9HBB8 845 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 FAM184BQ9ULE4 1060 aa10.24□□□□□ -0.77
CLRN1-201ENST00000295911 EFCAB8A8MWE9 144 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 MEIS1O00470 390 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 PSMD10O75832 226 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 NDUFA10O95299 355 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 ZBTB7AO95365 584 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 IPO7O95373 1038 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 HNRNPH3P31942 346 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 MLLT3P42568 568 aaPredicted RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 HSD17B4P51659 736 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 PRELPP51888 382 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 USP14P54578 494 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 MARSP56192 900 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 GHRHRQ02643 423 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 GIT2Q14161 759 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 LRRC41Q15345 812 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 ZYXQ15942 572 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 CCDC40Q4G0X9 1142 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 PACS2Q86VP3 889 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 ZC3H3Q8IXZ2 948 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 NEK9Q8TD19 979 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 TEPSINQ96N21 525 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 SLF1Q9BQI6 1058 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 NUCKS1Q9H1E3 243 aaKnown RBP10.23□□□□□ -0.77
CLRN1-201ENST00000295911 LZTFL1Q9NQ48 299 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 KCND2Q9NZV8 630 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 CCPG1Q9ULG6 757 aa10.23□□□□□ -0.77
CLRN1-201ENST00000295911 WDR81Q562E7 1941 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 CTAGE9A4FU28 777 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 EIF3CLB5ME19 914 aaKnown RBP10.22□□□□□ -0.77
CLRN1-201ENST00000295911 C3orf80F5H4A9 247 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 NFKBIEO00221 500 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 CETN3O15182 167 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 CALUO43852 315 aaPredicted RBP10.22□□□□□ -0.77
CLRN1-201ENST00000295911 GAS7O60861 476 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 TBCAO75347 108 aaKnown RBP10.22□□□□□ -0.77
CLRN1-201ENST00000295911 BCRP11274 1271 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 PRSS12P56730 875 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 PPP2R3AQ06190 1150 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 PABPC4Q13310 644 aaKnown RBP eCLIP10.22□□□□□ -0.77
CLRN1-201ENST00000295911 WDR59Q6PJI9 974 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 SCFD1Q8WVM8 642 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 UBXN4Q92575 508 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 WDR24Q96S15 920 aa10.22□□□□□ -0.77
CLRN1-201ENST00000295911 RIT2Q99578 217 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms