RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 VPS37BQ9H9H4 285 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 GCNT4Q9P109 453 aa19.23■□□□□ 0.67
CDC42EP3-201ENST00000295324 BUB1O43683 1085 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 SIX6OS1Q8N1H7 587 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 P3H4Q92791 437 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 ATP2A3Q93084 1043 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 IPO5O00410 1097 aaKnown RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 GMNNO75496 209 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 CD2BP2O95400 341 aaKnown RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 TBC1D8O95759 1140 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 USP11P51784 963 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 ENOX1Q8TC92 643 aaKnown RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 GPT2Q8TD30 523 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 THAP9Q9H5L6 903 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 BCORL1Q5H9F3 1711 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZFYVE28Q9HCC9 887 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 VPS18Q9P253 973 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 CEMIPQ8WUJ3 1361 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 DPCR1Q3MIW9 517 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 UNC13DQ70J99 1090 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 DENND3A2RUS2 1198 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 XPAP23025 273 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 COL23A1Q86Y22 540 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 DESI2Q9BSY9 194 aa19.22■□□□□ 0.67
CDC42EP3-201ENST00000295324 POTEMA6NI47 508 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 LRRN2O75325 713 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 KRT15P19012 456 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 PSMC5P62195 406 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 INTS8Q75QN2 995 aaKnown RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 PALM2Q8IXS6 379 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF653Q96CK0 615 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 MRPL47Q9HD33 250 aaKnown RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 GABBR1Q9UBS5 961 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 GYS1P13807 737 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 SWSAP1Q6NVH7 229 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 CTAGE3PQ8IX95 158 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 CCDC110Q8TBZ0 833 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 MTRQ99707 1265 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 UBE2TQ9NPD8 197 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 COBLO75128 1261 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 TGFB2P61812 414 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 WHAMMP3Q1A5X7 153 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 NBPF11Q86T75 865 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 CAPN2P17655 700 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 CASP14P31944 242 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 ADCY8P40145 1251 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF667Q5HYK9 610 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 ZNF579Q8NAF0 562 aaKnown RBP19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 TMEM106CQ9BVX2 250 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 MXD3Q9BW11 206 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 SLC38A10Q9HBR0 1119 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 SEPT10Q9P0V9 454 aa19.21■□□□□ 0.67
CDC42EP3-201ENST00000295324 HUNKP57058 714 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 FYB2Q5VWT5 728 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 SPZ1Q9BXG8 430 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 RNF139Q8WU17 664 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 PFDN4Q9NQP4 134 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 AFG3L2Q9Y4W6 797 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 PPP2R5CQ13362 524 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 CUL4BQ13620 913 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 UBE2Q2Q8WVN8 375 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 DYDC2Q96IM9 177 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 DEFB129Q9H1M3 183 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 CPSF3Q9UKF6 684 aaKnown RBP19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 ZNF148Q9UQR1 794 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 GOLGA8IPA6NC78 632 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 GOLGA8JA6NMD2 632 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 GOLGA8SH3BPF8 625 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 MESDQ14696 234 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 PPP2R2CQ9Y2T4 447 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 SPATA31D1Q6ZQQ2 1576 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 H7C0C1 242 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 ATP5OP48047 213 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 CCDC121Q6ZUS5 278 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 ANKRD13AQ8IZ07 590 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 THEM5Q8N1Q8 247 aa19.2■□□□□ 0.66
CDC42EP3-201ENST00000295324 CD58P19256 250 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 DNAJC24Q6P3W2 148 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 MB21D1Q8N884 522 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 TMEM260Q9NX78 707 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 SFI1A8K8P3 1242 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 NDUFB10O96000 172 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 VIMP08670 466 aaKnown RBP19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 MAPK4P31152 587 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 HPDP32754 393 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 PHBP35232 272 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 PRPSAP1Q14558 356 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 ERCC6LQ2NKX8 1250 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 HHATQ5VTY9 493 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 HEXIM2Q96MH2 286 aaKnown RBP19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 KRT12Q99456 494 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 MST1RQ04912 1400 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 GCOM2Q9BZD3 368 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 ZNF543Q08ER8 600 aa19.19■□□□□ 0.66
CDC42EP3-201ENST00000295324 VPS52Q8N1B4 723 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms