RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CNOT6LQ96LI5 555 aaKnown RBP10.15□□□□□ -0.78
PDPN-201ENST00000294489 SENP7Q9BQF6 1050 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 TEKT3Q9BXF9 490 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 KCNH7Q9NS40 1196 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 AGTPBP1Q9UPW5 1226 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 PPP2R2CQ9Y2T4 447 aa10.15□□□□□ -0.78
PDPN-201ENST00000294489 POTEFA5A3E0 1075 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 STAM2O75886 525 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 POTEIP0CG38 1075 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.79
PDPN-201ENST00000294489 GPAT2Q6NUI2 795 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 POTEGQ6S5H5 508 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 ARMC9Q7Z3E5 817 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 MYOCDQ8IZQ8 938 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 TRPM7Q96QT4 1865 aa10.15□□□□□ -0.79
PDPN-201ENST00000294489 MAFGO15525 162 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 GAS7O60861 476 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 LYPLA2O95372 231 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 FXR1P51114 621 aaKnown RBP eCLIP10.14□□□□□ -0.79
PDPN-201ENST00000294489 PSMC6P62333 389 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 ITGB3BPQ13352 177 aaPredicted RBP10.14□□□□□ -0.79
PDPN-201ENST00000294489 GPRASP2Q96D09 838 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 INPP4AQ96PE3 977 aaPredicted RBP10.14□□□□□ -0.79
PDPN-201ENST00000294489 RMDN3Q96TC7 470 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 BTBD7Q9P203 1132 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 GJA5P36382 358 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
PDPN-201ENST00000294489 MOB2Q70IA6 237 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 ZNF507Q8TCN5 953 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 NOC4LQ9BVI4 516 aaKnown RBP10.14□□□□□ -0.79
PDPN-201ENST00000294489 A1CFQ9NQ94 594 aaKnown RBP10.14□□□□□ -0.79
PDPN-201ENST00000294489 TBC1D22BQ9NU19 505 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 UTRNP46939 3433 aa10.14□□□□□ -0.79
PDPN-201ENST00000294489 DOCK5Q9H7D0 1870 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 B4DLN1 442 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 CCDC175P0C221 793 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 CCND2P30279 289 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 FKBP1BP68106 108 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 TBC1D8BQ0IIM8 1120 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 GIT2Q14161 759 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 HERC4Q5GLZ8 1057 aaPredicted RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 FKBP15Q5T1M5 1219 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 TMTC1Q8IUR5 882 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ZC3H3Q8IXZ2 948 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 DNERQ8NFT8 737 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 EEF2KMTQ96G04 330 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 IWS1Q96ST2 819 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 NUP58Q9BVL2 599 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ABHD10Q9NUJ1 306 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 PFASO15067 1338 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 KRT9P35527 623 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ZCWPW2Q504Y3 356 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 SYT10Q6XYQ8 523 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 FASTKD5Q7L8L6 764 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 NSUN6Q8TEA1 469 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 OPTNQ96CV9 577 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 DYDC2Q96IM9 177 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 KCND2Q9NZV8 630 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 SLC45A1Q9Y2W3 748 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 LUC7L2Q9Y383 392 aaKnown RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 SOWAHDA6NJG2 315 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 PABPC4Q13310 644 aaKnown RBP eCLIP10.13□□□□□ -0.79
PDPN-201ENST00000294489 MTMR1Q13613 665 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 LRRC41Q15345 812 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ARHGEF16Q5VV41 709 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 TOGARAM2Q6ZUX3 1019 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 EPM2AIP1Q7L775 607 aaPredicted RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 RETREG2Q8NC44 543 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 RDM1Q8NG50 284 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 ASCC2Q9H1I8 757 aaPredicted RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 ZHX3Q9H4I2 956 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 RGL1Q9NZL6 768 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 WRAP73Q9P2S5 460 aaPredicted RBP10.13□□□□□ -0.79
PDPN-201ENST00000294489 NFASCO94856 1347 aa10.13□□□□□ -0.79
PDPN-201ENST00000294489 MYH11P35749 1972 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 RGS20O76081 388 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 NR3C2P08235 984 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 EIF2AK2P19525 551 aaKnown RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 COPB2P35606 906 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 CYP4A11Q02928 519 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 CYP26C1Q6V0L0 522 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 NSMFQ6X4W1 530 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 C1orf186Q6ZWK4 172 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 PCMTD1Q96MG8 357 aaPredicted RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 PURBQ96QR8 312 aaKnown RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 ASTN1O14525 1302 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 TRIM21P19474 475 aaKnown RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 FECHP22830 423 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 EDNRBP24530 442 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 ICAM3P32942 547 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 FKBP3Q00688 224 aaKnown RBP10.12□□□□□ -0.79
PDPN-201ENST00000294489 RAD51AP2Q09MP3 1159 aa10.12□□□□□ -0.79
PDPN-201ENST00000294489 GADL1Q6ZQY3 521 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms