RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 HADHAP40939 763 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 MKRN3Q13064 507 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 FAM47EQ6ZV65 393 aa17.37■□□□□ 0.37
SSRP1-202ENST00000293880 DDX28Q9NUL7 540 aaKnown RBP17.37■□□□□ 0.37
SSRP1-202ENST00000293880 LMNB2Q03252 620 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 DRC3Q9H069 523 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 NCK2O43639 380 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 GGCXP38435 758 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 ERFP50548 548 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 FAF2Q96CS3 445 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 SAYSD1Q9NPB0 183 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PALMO75781 387 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 SERPINI2O75830 405 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 HEMGNQ9BXL5 484 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 MMEP08473 750 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 ATP1A3P13637 1013 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 MCF2L2Q86YR7 1114 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 RETREG2Q8NC44 543 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 DYNLL2Q96FJ2 89 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 POLR3CQ9BUI4 534 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-202ENST00000293880 RWDD2AQ9UIY3 292 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 STRIP2Q9ULQ0 834 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 SERPING1P05155 500 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 XPAP23025 273 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PI16Q6UXB8 463 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 ST13P4Q8IZP2 240 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-202ENST00000293880 PPP1R36Q96LQ0 422 aa17.36■□□□□ 0.37
SSRP1-202ENST00000293880 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
SSRP1-202ENST00000293880 ABCC12Q96J65 1359 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 INO80B-WBP1J3KQ70 363 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 MYCP01106 439 aaPredicted RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 HOXA13P31271 388 aaPredicted RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 SLC39A14Q15043 492 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 MTERF2Q49AM1 385 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 INO80BQ9C086 356 aaPredicted RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 PER1O15534 1290 aaPredicted RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 PLCG1P19174 1290 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 KCNA1Q09470 495 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 PSMD2Q13200 908 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 ICE2Q659A1 982 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 VSTM4Q8IW00 320 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 NRBP2Q9NSY0 501 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 CEP170Q5SW79 1584 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 SKIP12755 728 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 OCRLQ01968 901 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 MAN2A1Q16706 1144 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 MDH1BQ5I0G3 518 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 RWDD4Q6NW29 188 aaKnown RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 RSRC2Q7L4I2 434 aaKnown RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 GOLGA8CPA6NN73 597 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 KDM1AO60341 852 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 NDUFA10O95299 355 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 HSPA4LO95757 839 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 ATG16L1Q676U5 607 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 FMO2Q99518 471 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 YEATS2Q9ULM3 1422 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 ARHGDIAP52565 204 aa17.35■□□□□ 0.37
SSRP1-202ENST00000293880 GFPT1Q06210 699 aaPredicted RBP17.35■□□□□ 0.37
SSRP1-202ENST00000293880 MCF2P10911 925 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 LCORLQ8N3X6 602 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 ATP7AQ04656 1500 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 MIS18BP1Q6P0N0 1132 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 TRIM49BA6NDI0 452 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 SPAG7O75391 227 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 FGGP02679 453 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 PYROXD1Q8WU10 500 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 PBKQ96KB5 322 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 ECT2Q9H8V3 914 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 EIF3CLB5ME19 914 aaKnown RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 UBE3AQ05086 875 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 DHTKD1Q96HY7 919 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 EIF3CQ99613 913 aaKnown RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 MTRQ99707 1265 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 MMP1P03956 469 aa17.34■□□□□ 0.37
SSRP1-202ENST00000293880 GPR101Q96P66 508 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 FOXP1Q9H334 677 aaPredicted RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 WARS2Q9UGM6 360 aaKnown RBP17.34■□□□□ 0.37
SSRP1-202ENST00000293880 GOLGA8QA0A0J9YX86 632 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 GTPBP10A4D1E9 387 aaKnown RBP17.33■□□□□ 0.37
SSRP1-202ENST00000293880 GOLGA8OA6NCC3 632 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 GOLGA8NF8WBI6 632 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 ZBTB24O43167 697 aaPredicted RBP17.33■□□□□ 0.37
SSRP1-202ENST00000293880 PRPSAP2O60256 369 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 MB21D1Q8N884 522 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 NEK9Q8TD19 979 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 CNOT10Q9H9A5 744 aaKnown RBP17.33■□□□□ 0.37
SSRP1-202ENST00000293880 GGT7Q9UJ14 662 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 MAPK13O15264 365 aa17.33■□□□□ 0.37
SSRP1-202ENST00000293880 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms