RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 CCDC43Q96MW1 224 aaKnown RBP18.51■□□□□ 0.55
CHRNE-201ENST00000293780 RUFY1Q96T51 708 aa18.51■□□□□ 0.55
CHRNE-201ENST00000293780 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
CHRNE-201ENST00000293780 BCAS3Q9H6U6 928 aa18.51■□□□□ 0.55
CHRNE-201ENST00000293780 KCNMB3Q9NPA1 279 aa18.51■□□□□ 0.55
CHRNE-201ENST00000293780 PCDHGC5Q9Y5F6 944 aa18.51■□□□□ 0.55
CHRNE-201ENST00000293780 GYS1P13807 737 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 NR2F2P24468 414 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 SNAP25P60880 206 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 PTK2Q05397 1052 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 GPATCH4Q5T3I0 446 aaKnown RBP18.5■□□□□ 0.55
CHRNE-201ENST00000293780 ZFPM1Q8IX07 1006 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 EPB41P11171 864 aaKnown RBP18.5■□□□□ 0.55
CHRNE-201ENST00000293780 MAGEA9P43362 315 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 NFIAQ12857 509 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 DPY19L2P1Q6NXN4 242 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 ZNF571Q7Z3V5 609 aaPredicted RBP18.5■□□□□ 0.55
CHRNE-201ENST00000293780 INPP4AQ96PE3 977 aaPredicted RBP18.5■□□□□ 0.55
CHRNE-201ENST00000293780 ANO3Q9BYT9 981 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 RNF14Q9UBS8 474 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 HDAC9Q9UKV0 1011 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 PCDHA1Q9Y5I3 950 aa18.5■□□□□ 0.55
CHRNE-201ENST00000293780 FAM196BA6NMK8 535 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 CETN3O15182 167 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 HOXD13P35453 343 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 IRF2BP2Q7Z5L9 587 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 CATSPER3Q86XQ3 398 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 ZC3H3Q8IXZ2 948 aaKnown RBP18.49■□□□□ 0.55
CHRNE-201ENST00000293780 DHX36Q9H2U1 1008 aaKnown RBP18.49■□□□□ 0.55
CHRNE-201ENST00000293780 LUC7LQ9NQ29 371 aaKnown RBP18.49■□□□□ 0.55
CHRNE-201ENST00000293780 SWAP70Q9UH65 585 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 FRMD3A2A2Y4 597 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
CHRNE-201ENST00000293780 ZNF772Q68DY9 489 aaPredicted RBP18.49■□□□□ 0.55
CHRNE-201ENST00000293780 KLHL7Q8IXQ5 586 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 PIK3R5Q8WYR1 880 aa18.49■□□□□ 0.55
CHRNE-201ENST00000293780 ZNF233A6NK53 670 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 EIF3HO15372 352 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHRNE-201ENST00000293780 ATP1A2P50993 1020 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 PABPC4Q13310 644 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHRNE-201ENST00000293780 GIT2Q14161 759 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 CDC42EP5Q6NZY7 148 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 PROCA1Q8NCQ7 364 aaPredicted RBP18.48■□□□□ 0.55
CHRNE-201ENST00000293780 MYH4Q9Y623 1939 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 RAD51CO43502 376 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 TAL1P17542 331 aaPredicted RBP18.48■□□□□ 0.55
CHRNE-201ENST00000293780 DOK7Q18PE1 504 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 PRR16Q569H4 304 aa18.48■□□□□ 0.55
CHRNE-201ENST00000293780 KCNK3O14649 394 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 MEIS2O14770 477 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 MYBP10242 640 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 SPIRE1Q08AE8 756 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 PDCLQ13371 301 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 NNTQ13423 1086 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 EDRF1Q3B7T1 1238 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 PACS2Q86VP3 889 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 UCHL3P15374 230 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 USP11P51784 963 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
CHRNE-201ENST00000293780 CFAP58Q5T655 872 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 SFR1Q86XK3 245 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 USP38Q8NB14 1042 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 RBM46Q8TBY0 533 aaKnown RBP18.47■□□□□ 0.55
CHRNE-201ENST00000293780 DNAJC18Q9H819 358 aa18.47■□□□□ 0.55
CHRNE-201ENST00000293780 AJAP1Q9UKB5 411 aaPredicted RBP18.47■□□□□ 0.55
CHRNE-201ENST00000293780 RSPH10B2B2RC85 870 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 RSPH10BP0C881 870 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 SPATA31C1P0DKV0 1188 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 CACNB3P54284 484 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 PAK2Q13177 524 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 GBP6Q6ZN66 633 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 SPAG5Q96R06 1193 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 REEP2Q9BRK0 252 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 SAMM50Q9Y512 469 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 PCDHAC2Q9Y5I4 1007 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 CYP3A7-CYP3A51PA0A087WV96 503 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 EEF2P13639 858 aaKnown RBP18.46■□□□□ 0.55
CHRNE-201ENST00000293780 CYP3A7P24462 503 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 PON1P27169 355 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 HOXA10P31260 410 aaPredicted RBP18.46■□□□□ 0.55
CHRNE-201ENST00000293780 DDR1Q08345 913 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 DCAF17Q5H9S7 520 aaPredicted RBP18.46■□□□□ 0.55
CHRNE-201ENST00000293780 ETNPPLQ8TBG4 499 aa18.46■□□□□ 0.55
CHRNE-201ENST00000293780 ARMCX3Q9UH62 379 aaPredicted RBP18.46■□□□□ 0.55
CHRNE-201ENST00000293780 AKAP3O75969 853 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 CASP4P49662 377 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 SKOR1P84550 965 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 ARHGAP4P98171 946 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 RPS6KA1Q15418 735 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 KNOP1Q1ED39 458 aaKnown RBP18.45■□□□□ 0.54
CHRNE-201ENST00000293780 APOBEC3HQ6NTF7 200 aaKnown RBP18.45■□□□□ 0.54
CHRNE-201ENST00000293780 PPP4R3CPQ6ZMV5 832 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 MBOAT7Q96N66 472 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 TMEM59LQ9UK28 342 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 PITPNM2Q9BZ72 1349 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 ADAMTSL1Q8N6G6 1762 aa18.45■□□□□ 0.54
CHRNE-201ENST00000293780 ATAD5Q96QE3 1844 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms