RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SEPT6Q14141 434 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 TUBB6Q9BUF5 446 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 BHMT2Q9H2M3 363 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 STK38LQ9Y2H1 464 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 ABCB11O95342 1321 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 A0A087WWV3 80 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 FTCDO95954 541 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 TTLL6Q8N841 843 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SUGT1Q9Y2Z0 365 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SART1O43290 800 aaKnown RBP13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SEC31AO94979 1220 aaKnown RBP13.82□□□□□ -0.2
PTCD1-201ENST00000292478 IREB2P48200 963 aaKnown RBP13.82□□□□□ -0.2
PTCD1-201ENST00000292478 PLTPP55058 493 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 RNF169Q8NCN4 708 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 MCPH1Q8NEM0 835 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SCYL1Q96KG9 808 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 BEGAINQ9BUH8 593 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SEL1LQ9UBV2 794 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 SESTD1Q86VW0 696 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 FAM167AQ96KS9 214 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 Q9H521 79 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 NUB1Q9Y5A7 615 aa13.82□□□□□ -0.2
PTCD1-201ENST00000292478 CRB1P82279 1406 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 PODXLO00592 558 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ARL4AP40617 200 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 DHX9Q08211 1270 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 GOLPH3LQ9H4A5 285 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 E9PCH4 1651 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ARHGAP42A6NI28 874 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 MSH2P43246 934 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 RWDD2BP57060 319 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 RC3H1Q5TC82 1133 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 POC1B-GALNT4F8VUJ3 575 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 KIF3CO14782 793 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 DR1Q01658 176 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 MUM1Q2TAK8 710 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 TBC1D9BQ66K14 1250 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 PDXDC2PQ6P474 469 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 UHMK1Q8TAS1 419 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 GDAQ9Y2T3 454 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 GSG1L2A8MUP6 293 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ITKQ08881 620 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 CTTNQ14247 550 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 DALRD3Q5D0E6 543 aaKnown RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ZNF512BQ96KM6 892 aaPredicted RBP13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ATP8A1Q9Y2Q0 1164 aa13.81□□□□□ -0.2
PTCD1-201ENST00000292478 ABCA9Q8IUA7 1624 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 HMGB1P1B2RPK0 211 aaPredicted RBP13.8□□□□□ -0.2
PTCD1-201ENST00000292478 PRDX5P30044 214 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 PDE1BQ01064 536 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 PPP2R5CQ13362 524 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 RAD17O75943 681 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 CYP2D6P10635 497 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 CLCN6P51797 869 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 KPNA2P52292 529 aaKnown RBP13.8□□□□□ -0.2
PTCD1-201ENST00000292478 VCX3AQ9NNX9 186 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 K7ERI5 159 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 CPP00450 1065 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 FDX1P10109 184 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 C6orf118Q5T5N4 469 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 KCTD16Q68DU8 428 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 CAPN12Q6ZSI9 719 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 RPF1Q9H9Y2 349 aaKnown RBP13.8□□□□□ -0.2
PTCD1-201ENST00000292478 GH2P01242 217 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 EXOSC10Q01780 885 aaKnown RBP13.8□□□□□ -0.2
PTCD1-201ENST00000292478 GPR162Q16538 588 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 SLC27A3Q5K4L6 730 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 BZW1Q7L1Q6 419 aaKnown RBP13.8□□□□□ -0.2
PTCD1-201ENST00000292478 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 RFX1P22670 979 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 CCT5P48643 541 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 KRT76Q01546 638 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 ADCY2Q08462 1091 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 PSMD6Q15008 389 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 NXNQ6DKJ4 435 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 FMO2Q99518 471 aa13.8□□□□□ -0.2
PTCD1-201ENST00000292478 SLC26A4O43511 780 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 SFNP31947 248 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 MSTO1Q9BUK6 570 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 EFCC1Q9HA90 598 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 IPO5O00410 1097 aaKnown RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 KRT3P12035 628 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 CDC27P30260 824 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 HOXA13P31271 388 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 CASP8Q14790 479 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 KCTD6Q8NC69 237 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms