RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 VPS36Q86VN1 386 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 NOA1Q8NC60 698 aaKnown RBP5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 GMCL1P1Q8NEA9 526 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 MKL1Q969V6 931 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 DNAJC19Q96DA6 116 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 GMCL1Q96IK5 515 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 RUFY1Q96T51 708 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 LACRTQ9GZZ8 138 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 DNAJC18Q9H819 358 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 KCNMB3Q9NPA1 279 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 FAM198AQ9UFP1 575 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 ARMCX3Q9UH62 379 aaPredicted RBP5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 RABGAP1Q9Y3P9 1069 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 ANKRD31Q8N7Z5 1873 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 ADAMTSL1Q8N6G6 1762 aa5.34□□□□□ -1.56
PPP1R9A-201ENST00000289495 MYH7BA7E2Y1 1941 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SSU72P8A0A1W2PR75 194 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MEIS1O00470 390 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SRGAP2O75044 1071 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SASH3O75995 380 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 GCNT3O95395 438 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MOCS3O95396 460 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CFBP00751 764 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 TFRCP02786 760 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SERPING1P05155 500 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 PLEKP08567 350 aaPredicted RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SLURP2P0DP57 97 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 STAT2P52630 851 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 FOXK1P85037 733 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 KLHL30Q0D2K2 578 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SFR1Q86XK3 245 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CCDC155Q8N6L0 562 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 TAF4BQ92750 862 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CCDC43Q96MW1 224 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MRIQ9BWK5 157 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MLXIPQ9HAP2 919 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 PDE11AQ9HCR9 933 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CALCOCO1Q9P1Z2 691 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 VPS18Q9P253 973 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 ARHGAP20Q9P2F6 1191 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 NPHP3-ACAD11A0A0J9YXS1 232 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CHMP2AO43633 222 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MED24O75448 989 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 XRCC5P13010 732 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 HOXA13P31271 388 aaPredicted RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 HNRNPH3P31942 346 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SREBF1P36956 1147 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 LMAN1P49257 510 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CASP8Q14790 479 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 ECM1Q16610 540 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 IFI16Q16666 785 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 EDRF1Q3B7T1 1238 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 BEND6Q5SZJ8 279 aaPredicted RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 LEKR1Q6ZMV7 388 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SPICE1Q8N0Z3 855 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 OGFOD1Q8N543 542 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 GLIS3Q8NEA6 775 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MMS19Q96T76 1030 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CYP3A7-CYP3A51PA0A087WV96 503 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 TCP10L2B9ZVM9 353 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 GCOM1H8Y6P7 765 aaPredicted RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 EPHB6O15197 1021 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 AFPP02771 609 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 POLR2MP0CAP2 368 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 GAP43P17677 238 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CYP3A7P24462 503 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 RPA1P27694 616 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 MATR3P43243 847 aaKnown RBP eCLIP5.33□□□□□ -1.564e-7■■■□□ 16.8
PPP1R9A-201ENST00000289495 DNA2P51530 1060 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 RASSF7Q02833 373 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 EHHADHQ08426 723 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 C2orf54Q08AI8 447 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 FAM83BQ5T0W9 1011 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CCDC174Q6PII3 467 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 HS2ST1Q7LGA3 356 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CHURC1Q8WUH1 139 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 VEZTQ9HBM0 779 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 METTL14Q9HCE5 456 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 CWC15Q9P013 229 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 TCEAL9Q9UHQ7 104 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 HERC5Q9UII4 1024 aaKnown RBP5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 SNX12Q9UMY4 172 aa5.33□□□□□ -1.56
PPP1R9A-201ENST00000289495 TARSL2A2RTX5 802 aaKnown RBP5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 RCCD1A6NED2 376 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 GAS7O60861 476 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 GFPT1Q06210 699 aaPredicted RBP5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 TNIP1Q15025 636 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 DLGAP5Q15398 846 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 Q4G0T1 1027 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 ZCWPW2Q504Y3 356 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 LRCH2Q5VUJ6 765 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 C8orf74Q6P047 294 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 WDR93Q6P2C0 686 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 TRIM59Q8IWR1 403 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 ANKRD13CQ8N6S4 541 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 FAM71BQ8TC56 605 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 PSMB7Q99436 277 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 REEP2Q9BRK0 252 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 BHMT2Q9H2M3 363 aa5.32□□□□□ -1.56
PPP1R9A-201ENST00000289495 MED4Q9NPJ6 270 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms