RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 INTS13Q9NVM9 706 aa8.36□□□□□ -1.07
TRIM42-201ENST00000286349 FBXO9Q9UK97 447 aaPredicted RBP8.36□□□□□ -1.07
TRIM42-201ENST00000286349 PVALEFA0A1B0GWK0 134 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 USP17L10C9JJH3 530 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 AKR1B15C9JRZ8 316 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CELF2O95319 508 aaKnown RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CASP1P29466 404 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CDC25AP30304 524 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CAP2P40123 477 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TXKP42681 527 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 POU5F1Q01860 360 aaKnown RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 E4F1Q66K89 784 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TTBK2Q6IQ55 1244 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CNGA4Q8IV77 575 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TRIM42Q8IWZ5 723 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 SLFN12Q8IYM2 578 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 MYOCDQ8IZQ8 938 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF483Q8TF39 744 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PPM1EQ8WY54 764 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 STAMQ92783 540 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PMM1Q92871 262 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CLMNQ96JQ2 1002 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 YIPF2Q9BWQ6 316 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TRIM9Q9C026 710 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TMEM260Q9NX78 707 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 DDX25Q9UHL0 483 aaKnown RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PCDHA1Q9Y5I3 950 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TMEM232C9JQI7 657 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 F5H6K3 240 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 ZSCAN9O15535 394 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 KLRC4O43908 158 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PBX1P40424 430 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PRCPP42785 496 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 STX17P56962 302 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 KLRC3Q07444 240 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PRPF4BQ13523 1007 aaKnown RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 QRICH1Q2TAL8 776 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 TCP11X2Q5H9J9 407 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 BTNL9Q6UXG8 535 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 APTXQ7Z2E3 356 aaKnown RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 SMYD4Q8IYR2 804 aaPredicted RBP8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PPP1R13BQ96KQ4 1090 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF341Q9BYN7 854 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 SH2D4AQ9H788 454 aa8.35□□□□□ -1.07
TRIM42-201ENST00000286349 PCNTO95613 3336 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 CYP3A7-CYP3A51PA0A087WV96 503 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 PP2D1A8MPX8 630 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 F8VZ95 297 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 TBX3O15119 743 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 PPP1R11O60927 126 aaPredicted RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 FGFR1OPO95684 399 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 GH2P01242 217 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 BMP3P12645 472 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 CYP3A7P24462 503 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 SLC16A2P36021 539 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 FOXR2Q6PJQ5 311 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 ARMC2Q8NEN0 867 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 LARP4BQ92615 738 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 TAF4BQ92750 862 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 IQCDQ96DY2 449 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 KCNJ18B7U540 433 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 N4BP3O15049 544 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 CTNND1O60716 968 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 TDP2O95551 362 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 ZNF24P17028 368 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 USP8P40818 1118 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 COPB1P53618 953 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 ASIC1P78348 528 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 MAP3K9P80192 1104 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 PDE4DQ08499 809 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 FSTL1Q12841 308 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 KCNJ12Q14500 433 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 HYIQ5T013 277 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 SYDE2Q5VT97 1194 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 UNC13DQ70J99 1090 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 FBXO11Q86XK2 927 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 GBA2Q9HCG7 927 aaPredicted RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 A1CFQ9NQ94 594 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
TRIM42-201ENST00000286349 SNCAIPQ9Y6H5 919 aa8.34□□□□□ -1.07
TRIM42-201ENST00000286349 A0A1W2PQC6 194 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 USP27XA6NNY8 438 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 SLC37A4O43826 429 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
TRIM42-201ENST00000286349 NDUFB10O96000 172 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 CCNE1P24864 410 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 ABL2P42684 1182 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 GJA8P48165 433 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 SFSWAPQ12872 951 aaKnown RBP8.33□□□□□ -1.08
TRIM42-201ENST00000286349 VGLL4Q14135 290 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 KRT31Q15323 416 aa8.33□□□□□ -1.08
TRIM42-201ENST00000286349 TMEM119Q4V9L6 283 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms