RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 PYM1Q9BRP8 204 aaKnown RBP3.14□□□□□ -1.91
CHD1-201ENST00000284049 FTOQ9C0B1 505 aaKnown RBP eCLIP3.14□□□□□ -1.91
CHD1-201ENST00000284049 TRIM39Q9HCM9 518 aa3.14□□□□□ -1.91
CHD1-201ENST00000284049 SARS2Q9NP81 518 aaKnown RBP3.14□□□□□ -1.91
CHD1-201ENST00000284049 EIF2B3Q9NR50 452 aaKnown RBP3.14□□□□□ -1.91
CHD1-201ENST00000284049 RIC8BQ9NVN3 520 aa3.14□□□□□ -1.91
CHD1-201ENST00000284049 NR2E3Q9Y5X4 410 aa3.14□□□□□ -1.91
CHD1-201ENST00000284049 PTPRTO14522 1441 aa3.14□□□□□ -1.91
CHD1-201ENST00000284049 A0A1W2PQ27 194 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 A0A1W2PQ64 194 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 A0A1W2PQC6 194 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 A0A1W2PQD8 194 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 RASA4BC9J798 803 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 RASA4O43374 803 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 FTLP02792 175 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 FAM163BP0C2L3 166 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 BRAFP15056 766 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 SLC12A1Q13621 1099 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 TAF11Q15544 211 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CLRN3Q8NCR9 226 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 AFAP1L1Q8TED9 768 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 LRTOMTQ8WZ04 291 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 GAL3ST3Q96A11 431 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ITGB1BP2Q9UKP3 347 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 DIS3Q9Y2L1 958 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 DUOX2Q9NRD8 1548 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ERBINQ96RT1 1412 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 MEIS3P2A8K0S8 358 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ZNF423Q2M1K9 1284 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 PAN2Q504Q3 1202 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 MSANTD4Q8NCY6 345 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ACSS2Q9NR19 701 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 MBIPQ9NS73 344 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ODF2LQ9ULJ1 636 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 BACE2Q9Y5Z0 518 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 SPATA31D1Q6ZQQ2 1576 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 BHMG1C9JSJ3 638 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 GAS2O43903 313 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 MAPTP10636 758 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 CD247P20963 164 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 PRIM2P49643 509 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ZNF267Q14586 743 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 TOR2AQ5JU69 321 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CDCP2Q5VXM1 449 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 LILRA6Q6PI73 481 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 TXNDC11Q6PKC3 985 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 DEPTORQ8TB45 409 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 FSD1Q9BTV5 496 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CCDC68Q9H2F9 335 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 NUB1Q9Y5A7 615 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 PRAMEF25A6NGN4 478 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 STXBP3O00186 592 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 GLRX3O76003 335 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 EYA4O95677 639 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 SLC9A1P19634 815 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CYP7A1P22680 504 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 GRIA2P42262 883 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 GBX1Q14549 363 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 PGS1Q32NB8 556 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 NUTM2GQ5VZR2 741 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 POTEAQ6S8J7 498 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 TAB3Q8N5C8 712 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 MGARPQ8TDB4 240 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 SGCZQ96LD1 299 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CNTNAP3BQ96NU0 1288 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CNTNAP3Q9BZ76 1288 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CELF4Q9BZC1 486 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 PCDHGB2Q9Y5G2 931 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 TRIM64A6NGJ6 449 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 TRIM64BA6NI03 449 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 H3BML4 177 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 K7ENM7 598 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 LSSP48449 732 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 MAP3K12Q12852 859 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 SIM2Q14190 667 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 SMC1AQ14683 1233 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 ODF1Q14990 250 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 TERF2Q15554 542 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ACSF2Q96CM8 615 aaPredicted RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 TRMT2BQ96GJ1 504 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 NUCKS1Q9H1E3 243 aaKnown RBP3.13□□□□□ -1.91
CHD1-201ENST00000284049 GP6Q9HCN6 339 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 CYP4F12Q9HCS2 524 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 NRXN1Q9ULB1 1477 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ASXL2Q76L83 1435 aa3.13□□□□□ -1.91
CHD1-201ENST00000284049 ANKRD18BA2A2Z9 1011 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 A6NCN8 305 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 MYO1CO00159 1063 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 GFPT2O94808 682 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ABCD1P33897 745 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CDK8P49336 464 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DSG1Q02413 1049 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 BROXQ5VW32 411 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 LMBRD2Q68DH5 695 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 SLC6A19Q695T7 634 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SWSAP1Q6NVH7 229 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SIRT2Q8IXJ6 389 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CCAR2Q8N163 923 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 TRIML1Q8N9V2 468 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms