RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZNF189O75820 626 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 HOXB7P09629 217 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 SLCO1A2P46721 670 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■□□□□ 8.7
NIPBL-201ENST00000282516 ALCAMQ13740 583 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 EFTUD2Q15029 972 aaKnown RBP eCLIP9.36□□□□□ -0.916e-6■■□□□ 13.1
NIPBL-201ENST00000282516 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 ALKBH8Q96BT7 664 aaKnown RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 BRIP1Q9BX63 1249 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 NDEL1Q9GZM8 345 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 CCNL1Q9UK58 526 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 SYNGAP1Q96PV0 1343 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 NPATQ14207 1427 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 ALAS1P13196 640 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 EMBQ6PCB8 327 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 PSMC2P35998 433 aaKnown RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 CEP78Q5JTW2 689 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 PLD3Q8IV08 490 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 SLC39A2Q9NP94 309 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 MIS18BP1Q6P0N0 1132 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 ARMCX2Q7L311 632 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 SLC26A7Q8TE54 656 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 ZBTB40Q9NUA8 1239 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 PRKAG2Q9UGJ0 569 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 PAIP2BQ9ULR5 123 aaKnown RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 COPEO14579 308 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 FANCAO15360 1455 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 MYL1P05976 194 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 DMC1Q14565 340 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 ZFP42Q96MM3 310 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 TUBGCP2Q9BSJ2 902 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 LRRC4Q9HBW1 653 aa9.36□□□□□ -0.91
NIPBL-201ENST00000282516 CAB39Q9Y376 341 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-201ENST00000282516 GADD45BO75293 160 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 CAV1Q03135 178 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ACSL3O95573 720 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 B4GALNT2Q8NHY0 566 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 CCDC90BQ9GZT6 254 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 DCDC2Q9UHG0 476 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 G3BP2Q9UN86 482 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 PIK3C2GO75747 1445 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 GOLGA8RI6L899 631 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 DEFA1P59665 94 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 DEFA3P59666 94 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 TFAMQ00059 246 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 MECOMQ03112 1051 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ADCY1Q08828 1119 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 SURF1Q15526 300 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 WDR75Q8IWA0 830 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 APOL6Q9BWW8 343 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 KIF1CO43896 1103 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 STAMQ92783 540 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 TBC1D23Q9NUY8 699 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 BLOC1S6Q9UL45 172 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 THOC2Q8NI27 1593 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 RGS9BPQ6ZS82 235 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ULK4Q96C45 1275 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 GTSE1Q9NYZ3 720 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 PCP11498 1178 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 TRAPPC10P48553 1259 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 HDDC2Q7Z4H3 204 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 LUZP2Q86TE4 346 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 PLA2G4DQ86XP0 818 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 TTLL11Q8NHH1 800 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 HPCAL4Q9UM19 191 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 UHRF1BP1LA0JNW5 1464 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 MAP3K15Q6ZN16 1313 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 DENND4BO75064 1496 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 hCG_1642624A0A1W2PR95 340 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 NBNO60934 754 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 KRT7P08729 469 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 POLA2Q14181 598 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 C16orf72Q14CZ0 275 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 MAPRE2Q15555 327 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ADCK1Q86TW2 530 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ARHGEF25Q86VW2 580 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ZNF555Q8NEP9 628 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 SH3GL3Q99963 347 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 BABAM1Q9NWV8 329 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 WDR91A4D1P6 747 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 PDHA1P08559 390 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ICA1Q05084 483 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 OTUD7BQ6GQQ9 843 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 HIBCHQ6NVY1 386 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 PJA2O43164 708 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 IL10P22301 178 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 EIF4A2Q14240 407 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 CDC37Q16543 378 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 GADL1Q6ZQY3 521 aa9.35□□□□□ -0.91
NIPBL-201ENST00000282516 SYMPKQ92797 1274 aaKnown RBP9.35□□□□□ -0.91
NIPBL-201ENST00000282516 ADCY9O60503 1353 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 ADGRF5Q8IZF2 1346 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 E7EWF7 191 aa9.34□□□□□ -0.91
NIPBL-201ENST00000282516 TOM1O60784 492 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms