RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 MICALCLQ6ZW33 695 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 C7orf25Q9BPX7 421 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 PAGR1Q9BTK6 254 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 DCP1AQ9NPI6 582 aaPredicted RBP12.45□□□□□ -0.42
SCLT1-201ENST00000281142 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 DDX20Q9UHI6 824 aaKnown RBP12.45□□□□□ -0.42
SCLT1-201ENST00000281142 ADAMTSL1Q8N6G6 1762 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 FAM170AA1A519 330 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 MYMKA6NI61 221 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 HSD17B3P37058 310 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 SMTNP53814 917 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 MAN2A1Q16706 1144 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 DACT2Q5SW24 774 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 DYNLL2Q96FJ2 89 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 CCDC114Q96M63 670 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 SLC24A3Q9HC58 644 aa12.45□□□□□ -0.42
SCLT1-201ENST00000281142 USP17L3A6NCW0 530 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 USP17L4A6NCW7 530 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 USP17L8P0C7I0 530 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 GLE1Q53GS7 698 aaKnown RBP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 USP17L1Q7RTZ2 530 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 CD302Q8IX05 232 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 KIRREL3Q8IZU9 778 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 MREGQ8N565 214 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 TBC1D5Q92609 795 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 VEZTQ9HBM0 779 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 TCP11L1Q9NUJ3 509 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 MYL1P05976 194 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 OR52Z1P0C646 297 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 NF2P35240 595 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 RDXP35241 583 aaKnown RBP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 E2F5Q15329 346 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 CDC37Q16543 378 aaPredicted RBP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 YTHDF3Q7Z739 585 aaKnown RBP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 PNMA1Q8ND90 353 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
SCLT1-201ENST00000281142 AP1M1Q9BXS5 423 aa12.44□□□□□ -0.42
SCLT1-201ENST00000281142 A0A087X0T9 212 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 STXBP3O00186 592 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NOL4O94818 638 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 FAM228BP0C875 321 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 TFAP4Q01664 338 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 CXCL9Q07325 125 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 LRRC55Q6ZSA7 311 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 RNF217Q8TC41 542 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 CCDC47Q96A33 483 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 FRMD3A2A2Y4 597 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 GRID2IPA4D2P6 1211 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 H0YGN5 161 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 FZD9O00144 591 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NEBLO76041 1014 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 HSPA9P38646 679 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 MECOMQ03112 1051 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 ZNF844Q08AG5 666 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 MEI1Q5TIA1 1274 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 EMC10Q5UCC4 262 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 CNNM4Q6P4Q7 775 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 CCDC121Q6ZUS5 278 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 SPATS2Q86XZ4 545 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 MAD2L2Q9UI95 211 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 A6NNZ2 444 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 ORC4O43929 436 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 GCFC2P16383 781 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 TXKP42681 527 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 GRB10Q13322 594 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 TUBB8Q3ZCM7 444 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NAIF1Q69YI7 327 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 TMED8Q6PL24 325 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 TBC1D22AQ8WUA7 517 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NSUN4Q96CB9 384 aaKnown RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 UIMC1Q96RL1 719 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 FGFBP2Q9BYJ0 223 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
SCLT1-201ENST00000281142 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.43□□□□□ -0.42
SCLT1-201ENST00000281142 MYH4Q9Y623 1939 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 PHF20L1A8MW92 1017 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 KCNK3O14649 394 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 GRIN3BO60391 1043 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
SCLT1-201ENST00000281142 KIF5BP33176 963 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 KIAA0753Q2KHM9 967 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 CYB5D1Q6P9G0 228 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 KCNK18Q7Z418 384 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 FUKQ8N0W3 1084 aa12.42□□□□□ -0.42
SCLT1-201ENST00000281142 USP38Q8NB14 1042 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms