RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TMEM150BA6NC51 233 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 FAM13AO94988 1023 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 RINT1Q6NUQ1 792 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 MNS1Q8NEH6 495 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 HSD17B14Q9BPX1 270 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 LXNQ9BS40 222 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 TEKT3Q9BXF9 490 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 GTPBP4Q9BZE4 634 aaKnown RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 ZNHIT6Q9NWK9 470 aaKnown RBP19.84■□□□□ 0.77
CAPN1-201ENST00000279247 PPP1R9AQ9ULJ8 1098 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 ATAD5Q96QE3 1844 aa19.84■□□□□ 0.77
CAPN1-201ENST00000279247 NDUFA10O95299 355 aa19.83■□□□□ 0.77
CAPN1-201ENST00000279247 SLC5A5Q92911 643 aa19.83■□□□□ 0.77
CAPN1-201ENST00000279247 MXRA8Q9BRK3 442 aa19.83■□□□□ 0.77
CAPN1-201ENST00000279247 KIF5CO60282 957 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 PTPRAP18433 802 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 TCERG1LQ5VWI1 586 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 RRAGAQ7L523 313 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 SCYL3Q8IZE3 742 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 GPC2Q8N158 579 aa19.83■□□□□ 0.76
CAPN1-201ENST00000279247 SYTL5Q8TDW5 730 aaPredicted RBP19.83■□□□□ 0.76
CAPN1-201ENST00000279247 GOLGA6L9A6NEM1 432 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 ZBED4O75132 1171 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 EYA4O95677 639 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 BACE1P56817 501 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 ARID5AQ03989 594 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 ZNF280CQ8ND82 737 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 RMDN3Q96TC7 470 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 POLR2AP24928 1970 aaKnown RBP19.82■□□□□ 0.76
CAPN1-201ENST00000279247 PHLPP2Q6ZVD8 1323 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 ZCWPW2Q504Y3 356 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 COBLL1Q53SF7 1204 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 DCAF17Q5H9S7 520 aaPredicted RBP19.82■□□□□ 0.76
CAPN1-201ENST00000279247 MIER3Q7Z3K6 550 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 KRT26Q7Z3Y9 468 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 EPC1Q9H2F5 836 aa19.82■□□□□ 0.76
CAPN1-201ENST00000279247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.82■□□□□ 0.763e-6■■■■■ 38.5
CAPN1-201ENST00000279247 PLA2G6O60733 806 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 MRPS9P82933 396 aaKnown RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 RNF207Q6ZRF8 634 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 CACNA2D4Q7Z3S7 1137 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 POLR3CQ9BUI4 534 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 KCTD10Q9H3F6 313 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 VWA5AO00534 786 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 HSD17B4P51659 736 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 BAATQ14032 418 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 SNRNP48Q6IEG0 339 aaKnown RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 SLC35F6Q8N357 371 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 ZNF397Q8NF99 534 aaPredicted RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 RNF146Q9NTX7 359 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 TCEAL9Q9UHQ7 104 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 ADM5C9JUS6 153 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 MTMR1Q13613 665 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 UTP14CQ5TAP6 766 aaKnown RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 KIAA1328Q86T90 577 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 CNKSR2Q8WXI2 1034 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 DNAJC7Q99615 494 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 REXO2Q9Y3B8 237 aaKnown RBP19.81■□□□□ 0.76
CAPN1-201ENST00000279247 PCDHB13Q9Y5F0 798 aa19.81■□□□□ 0.76
CAPN1-201ENST00000279247 ZBED6P86452 979 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 ARHGEF16Q5VV41 709 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 MCF2L2Q86YR7 1114 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 TTYH3Q9C0H2 523 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 NHEJ1Q9H9Q4 299 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-201ENST00000279247 PITPNM2Q9BZ72 1349 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 FAM170AA1A519 330 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 HOXD13P35453 343 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 ITGB3BPQ13352 177 aaPredicted RBP19.8■□□□□ 0.76
CAPN1-201ENST00000279247 PPP2R5CQ13362 524 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 TKFCQ3LXA3 575 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 ERO1AQ96HE7 468 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 ERGIC2Q96RQ1 377 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 L2HGDHQ9H9P8 463 aa19.8■□□□□ 0.76
CAPN1-201ENST00000279247 CETN3O15182 167 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 ATP9AO75110 1047 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 CASP4P49662 377 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 NUP58Q9BVL2 599 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 SIK3Q9Y2K2 1263 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 ARHGEF35A5YM69 484 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 LRRC53A6NM62 1247 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 USP14P54578 494 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 KNOP1Q1ED39 458 aaKnown RBP19.79■□□□□ 0.76
CAPN1-201ENST00000279247 DEF6Q9H4E7 631 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 CENPFP49454 3210 aa19.79■□□□□ 0.76
CAPN1-201ENST00000279247 ENC1O14682 589 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 SETQ01105 290 aaPredicted RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 COG2Q14746 738 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 NEK11Q8NG66 645 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 LSM14BQ9BX40 385 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 DUSP10Q9Y6W6 482 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 FRMD3A2A2Y4 597 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 KIF20AO95235 890 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 IPO7O95373 1038 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 ODR4Q5SWX8 454 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 CCDC122Q5T0U0 273 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 APOBEC3FQ8IUX4 373 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 PUF60Q9UHX1 559 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 POLR2FP61218 127 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms