RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 U3KQE9 123 aa5.48□□□□□ -1.53
CD44-202ENST00000278385 E9PCH4 1651 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 GOLIM4O00461 696 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 PAX4O43316 350 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 FIBPO43427 364 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 ORC4O43929 436 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 ADAMTS4O75173 837 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 ABLIM3O94929 683 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 HSP90AB1P08238 724 aaKnown RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 ITGA4P13612 1032 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 PHKG2P15735 406 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 JUNBP17275 347 aaPredicted RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 ZNF280AP59817 542 aaPredicted RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 SLC7A5Q01650 507 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 TOMM20Q15388 145 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 DDX46Q7L014 1031 aaKnown RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 ADAT2Q7Z6V5 191 aaKnown RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 TTC6Q86TZ1 520 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 SPPL2CQ8IUH8 684 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 TMEM192Q8IY95 271 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 CLASRPQ8N2M8 674 aaKnown RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 DAGLBQ8NCG7 672 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 ST13P5Q8NFI4 369 aaPredicted RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 ZNF669Q96BR6 464 aaPredicted RBP5.47□□□□□ -1.53
CD44-202ENST00000278385 TIFAQ96CG3 184 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 MTMR8Q96EF0 704 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 PLCB1Q9NQ66 1216 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 CHST7Q9NS84 486 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 CCDC144AA2RUR9 1427 aa5.47□□□□□ -1.53
CD44-202ENST00000278385 METP08581 1390 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 ANKRD30BQ9BXX2 1392 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 ALKQ9UM73 1620 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PRQ8 180 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 SIGLEC6O43699 453 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 PPM1BO75688 479 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 RPN1P04843 607 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 TGFB3P10600 412 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 ZSCAN20P17040 1043 aaPredicted RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 NOP2P46087 812 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 ITKQ08881 620 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 DDX10Q13206 875 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 FAM133BQ5BKY9 247 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 DACT2Q5SW24 774 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 MZT2AQ6P582 158 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 CFAP161Q6P656 301 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 LVRNQ6Q4G3 990 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 RNF111Q6ZNA4 994 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 RUFY4Q6ZNE9 571 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 ATG4DQ86TL0 474 aaPredicted RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 JPH3Q8WXH2 748 aaPredicted RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 RHOBTB2Q9BYZ6 727 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 PRR13Q9NZ81 148 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 SF3B6Q9Y3B4 125 aaKnown RBP5.46□□□□□ -1.54
CD44-202ENST00000278385 SPEF1Q9Y4P9 236 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 TRPM2O94759 1503 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 PTPRUQ92729 1446 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 DIP2AQ14689 1571 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 NWD1Q149M9 1564 aa5.46□□□□□ -1.54
CD44-202ENST00000278385 DNAJC25-GNG10A0A024R161 153 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 hCG_1984214I3L0E3 225 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 NBNO60934 754 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 GJB6O95452 261 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 RNASE1P07998 156 aaKnown RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 U2AF1L5P0DN76 240 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 SRFP11831 508 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 SCP2P22307 547 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 RPL10P27635 214 aaKnown RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 EIF5P55010 431 aaKnown RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 U2AF1Q01081 240 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-202ENST00000278385 CHAF1AQ13111 956 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 TCIRG1Q13488 830 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 BIRC3Q13489 604 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 CBX2Q14781 532 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 NCAPHQ15003 741 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 LONRF2Q1L5Z9 754 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 CCDC92Q53HC0 331 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 TDRD10Q5VZ19 366 aaKnown RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 JAKMIP3Q5VZ66 844 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 STRA8Q7Z7C7 330 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 RASSF3Q86WH2 238 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 MSL3Q8N5Y2 521 aaKnown RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 VPS37AQ8NEZ2 397 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 RSPH1Q8WYR4 309 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 GJA10Q969M2 543 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.45□□□□□ -1.54
CD44-202ENST00000278385 PRDM14Q9GZV8 571 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 PRDM7Q9NQW5 492 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 FAM86C1Q9NVL1 165 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 GFOD1Q9NXC2 390 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 ADGRE2Q9UHX3 823 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 TMEM59LQ9UK28 342 aa5.45□□□□□ -1.54
CD44-202ENST00000278385 ZNF214Q9UL59 606 aaPredicted RBP5.45□□□□□ -1.54
CD44-202ENST00000278385 DIS3Q9Y2L1 958 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms