RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 USP28Q96RU2 1077 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 AP1M1Q9BXS5 423 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 PEX19P40855 299 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 EFCAB8A8MWE9 144 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 E5RI56 91 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 MRPS25P82663 173 aaKnown RBP21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 ATG3Q9NT62 314 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 MAP3K15Q6ZN16 1313 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 C11orf74Q86VG3 221 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 ZBTB1Q9Y2K1 713 aa21.9■■□□□ 1.1
CACNA1B-201ENST00000277549 PPP2R5BQ15173 497 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 JPH2Q9BR39 696 aaPredicted RBP21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 HEY1Q9Y5J3 304 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 POLR3AO14802 1390 aaPredicted RBP21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 HMBSP08397 361 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 CC2D1AQ6P1N0 951 aaPredicted RBP21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 PI16Q6UXB8 463 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 BTN2A2Q8WVV5 523 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 SPON2Q9BUD6 331 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 CAPN11Q9UMQ6 739 aa21.89■■□□□ 1.1
CACNA1B-201ENST00000277549 DDHD2O94830 711 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 GSPT1P15170 499 aaKnown RBP21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 ARHGAP25P42331 645 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 EGFL8Q99944 293 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 RAD18Q9NS91 495 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 IMPACTQ9P2X3 320 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 GTPBP10A4D1E9 387 aaKnown RBP21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 ZBED1O96006 694 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 TSPY1Q01534 308 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 GTSE1Q9NYZ3 720 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 DFFAO00273 331 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 RAPGEF5Q92565 580 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 MMP19Q99542 508 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 PNMA3Q9UL41 463 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 PPP2R2CQ9Y2T4 447 aa21.89■■□□□ 1.09
CACNA1B-201ENST00000277549 UBA6A0AVT1 1052 aaPredicted RBP21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 TUBBP07437 444 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 MMP10P09238 476 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 PPP1R36Q96LQ0 422 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 TRAIPQ9BWF2 469 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 SRGAP2O75044 1071 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 KLC3Q6P597 504 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 LCORLQ8N3X6 602 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 ATP5JP18859 108 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 SYTL2Q9HCH5 934 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 MT-ND3P03897 115 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 CASP14P31944 242 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 CYTH2Q99418 400 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 DNAJC7Q99615 494 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 POLR3CQ9BUI4 534 aaPredicted RBP21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 PIM2Q9P1W9 311 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 LIG3P49916 1009 aa21.88■■□□□ 1.09
CACNA1B-201ENST00000277549 TUBB2AQ13885 445 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 ASPRV1Q53RT3 343 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 SMAD5Q99717 465 aaKnown RBP21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 TUBB2BQ9BVA1 445 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 KLHL8Q9P2G9 620 aaPredicted RBP21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 CHEK2O96017 543 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 CENPAP49450 140 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 SIK2Q9H0K1 926 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 NUMBP49757 651 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 BPIFB4P59827 614 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 DAB2P98082 770 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 POU5F1BQ06416 359 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 SYCP2LQ5T4T6 812 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 ADCK2Q7Z695 626 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 PRR23AA6NEV1 266 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 ABTB1Q969K4 478 aaPredicted RBP21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 COPB1P53618 953 aaKnown RBP21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 IL9RQ01113 521 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 TUBGCP2Q9BSJ2 902 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 BABAM1Q9NWV8 329 aa21.87■■□□□ 1.09
CACNA1B-201ENST00000277549 GH2P01242 217 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 CAPS2Q9BXY5 557 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 HIP1RO75146 1068 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 HDLBPQ00341 1268 aaKnown RBP21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 CHAMP1Q96JM3 812 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 TESK2Q96S53 571 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 ADCY9O60503 1353 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 CTSHP09668 335 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 COPB2P35606 906 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 K7ERI5 159 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 RBL2Q08999 1139 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 AP1B1Q10567 949 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 SENP1Q9P0U3 644 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 ERICH1Q86X53 443 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 ABCC4O15439 1325 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 SCRN1Q12765 414 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 KIF17Q9P2E2 1029 aa21.86■■□□□ 1.09
CACNA1B-201ENST00000277549 GOLGA8KD6RF30 607 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 ATXN7L3BQ96GX2 97 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 FAN1Q9Y2M0 1017 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 SEMA3EO15041 775 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 E2F6O75461 281 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 ECEL1O95672 775 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 B4GALNT2Q8NHY0 566 aa21.85■■□□□ 1.09
CACNA1B-201ENST00000277549 ZFYVE9O95405 1425 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms