RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 CAND2O75155 1236 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 SHBGP04278 402 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 PAX7P23759 505 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 GNA11P29992 359 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 KCNH2Q12809 1159 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 ZNF211Q13398 564 aaPredicted RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 BYSLQ13895 437 aaKnown RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 NAA25Q14CX7 972 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 UBAP2Q5T6F2 1119 aaKnown RBP14.12□□□□□ -0.15
COL8A1-202ENST00000273342 VEZTQ9HBM0 779 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 MCM8Q9UJA3 840 aa14.12□□□□□ -0.15
COL8A1-202ENST00000273342 PALM3A6NDB9 673 aaPredicted RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 CLNS1AP54105 237 aaKnown RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 PREPLQ4J6C6 727 aaPredicted RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 ALKBH5Q6P6C2 394 aaKnown RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 TBC1D1Q86TI0 1168 aaPredicted RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 MTFR1LQ9H019 292 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 BCAS3Q9H6U6 928 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 GPCPD1Q9NPB8 672 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 DONSONQ9NYP3 566 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 PGRMC1O00264 195 aaKnown RBP14.11□□□□□ -0.15
COL8A1-202ENST00000273342 PPP1R2P41236 205 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 ITPK1Q13572 414 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 RUFY4Q6ZNE9 571 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 GLG1Q92896 1179 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 SGSM3Q96HU1 749 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 KIAA1024Q9UPX6 916 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 L3MBTL1Q9Y468 752 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 CD2APQ9Y5K6 639 aa14.11□□□□□ -0.15
COL8A1-202ENST00000273342 PVALEFA0A1B0GWK0 134 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 BUB1BO60566 1050 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 FGGP02679 453 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 CCDC38Q502W7 563 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 U2AF1L4Q8WU68 220 aaKnown RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 THOC1Q96FV9 657 aaKnown RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 OSGEPQ9NPF4 335 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 SEPT11Q9NVA2 429 aaKnown RBP14.1□□□□□ -0.15
COL8A1-202ENST00000273342 DOCK2Q92608 1830 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 UTRNP46939 3433 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 LOC102724428A0A0B4J2F2 783 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 RBAK-RBAKDNI3L0D1 243 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 SIK1P57059 783 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 DDB1Q16531 1140 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 DAGLBQ8NCG7 672 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 IKZF4Q9H2S9 585 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
COL8A1-202ENST00000273342 NEBLO76041 1014 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 EZRP15311 586 aaKnown RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 USP11P51784 963 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 PLTPP55058 493 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 TAX1BP1Q86VP1 789 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 EYA3Q99504 573 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 ELAC2Q9BQ52 826 aaKnown RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 BSDC1Q9NW68 430 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 CHORDC1Q9UHD1 332 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 NUP98P52948 1817 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 SPDYE3A6NKU9 549 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 F8W031 263 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 MEIS1O00470 390 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 VIMP08670 466 aaKnown RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 RASA1P20936 1047 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 NR2F2P24468 414 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 STAT3P40763 770 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 CASP5P51878 434 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 AADACL2Q6P093 401 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 PTF1AQ7RTS3 328 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 TMC3Q7Z5M5 1100 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 MGARPQ8TDB4 240 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 SCFD2Q8WU76 684 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 PSMD1Q99460 953 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 MLXIPLQ9NP71 852 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 AJAP1Q9UKB5 411 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 POTEB3A0JP26 581 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 POTECB2RU33 542 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 CHN1P15882 459 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 PPP2R5AQ15172 486 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 GALNT17Q6IS24 598 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 POTEBQ6S5H4 581 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 FBXO33Q7Z6M2 555 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 GPBP1Q86WP2 473 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 DNAJC19Q96DA6 116 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 CEP95Q96GE4 821 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 MTMR9Q96QG7 549 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 SRP68Q9UHB9 627 aaKnown RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 SNX24Q9Y343 169 aa14.09□□□□□ -0.15
COL8A1-202ENST00000273342 ATXN2Q99700 1313 aaKnown RBP14.09□□□□□ -0.15
COL8A1-202ENST00000273342 IFI35P80217 286 aaPredicted RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 CUL1Q13616 776 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 TATDN2Q93075 761 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms