RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 TKTP29401 623 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 CYTH1Q15438 398 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 ESX1Q8N693 406 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 USP38Q8NB14 1042 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 CDK19Q9BWU1 502 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 MYOM2P54296 1465 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 EIF4E1BA6NMX2 242 aaKnown RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 H7C1W4 665 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 NFRKBQ6P4R8 1299 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 SPATA18Q8TC71 538 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 FRS2Q8WU20 508 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 HSPH1Q92598 858 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 PPP2R3CQ969Q6 453 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 CCSER1Q9C0I3 900 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 BHMT2Q9H2M3 363 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 CABP1Q9NZU7 370 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 TAGLN3Q9UI15 199 aa9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
CTDSPL-201ENST00000273179 SPTLC1O15269 473 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 RAD51BO15315 384 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 KCNJ13O60928 360 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 IDH1O75874 414 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 LVRNQ6Q4G3 990 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 ANO5Q75V66 913 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CAND1Q86VP6 1230 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 OLFM3Q96PB7 478 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 MOGAT1Q96PD6 335 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CARD9Q9H257 536 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CBY1Q9Y3M2 126 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 TRIM23P36406 574 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 ARL1P40616 181 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 MTHFRP42898 656 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CWF19L2Q2TBE0 894 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 SNX27Q96L92 541 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 MYOM1P52179 1685 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 SURF6O75683 361 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 HSD17B2P37059 387 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 PPFIA1Q13136 1202 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 NDUFA5Q16718 116 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 LPCAT2Q7L5N7 544 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 NDNQ99608 321 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 DESI2Q9BSY9 194 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CAMSAP1Q5T5Y3 1602 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CHL1O00533 1208 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 YKT6O15498 198 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 TGDSO95455 350 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 HCLS1P14317 486 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 FUT4P22083 530 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 ZNF76P36508 570 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 STT3AP46977 705 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 STAT2P52630 851 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 VCPP55072 806 aaKnown RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 PTK2Q05397 1052 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CCDC183Q5T5S1 534 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 RGS9BPQ6ZS82 235 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 FAM20CQ8IXL6 584 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 MIS12Q9H081 205 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 PARVAQ9NVD7 372 aa9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 ZMYND8Q9ULU4 1186 aaPredicted RBP9.6□□□□□ -0.87
CTDSPL-201ENST00000273179 CTAGE9A4FU28 777 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 SLC4A2P04920 1241 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 HAND2P61296 217 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 NR1D2Q14995 579 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 SLAIN1Q8ND83 568 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 TSEN34Q9BSV6 310 aaKnown RBP9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 TMEM206Q9H813 350 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 PLEKHA5Q9HAU0 1116 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 ALDH1L1O75891 902 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 ARIH2O95376 493 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 MYL6BP14649 208 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 NUP62P37198 522 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 KDSRQ06136 332 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 C6orf163Q5TEZ5 329 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 METTL11BQ5VVY1 283 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 LMTK2Q8IWU2 1503 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 PDZD8Q8NEN9 1154 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 FAM161BQ96MY7 647 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 SPTLC3Q9NUV7 552 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 TTC7AQ9ULT0 858 aaPredicted RBP9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 ANKRD36BQ8N2N9 1353 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 NBPF26B4DH59 902 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 SNX4O95219 450 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 CALM1P0DP23 149 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 CALM2P0DP24 149 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 CALM3P0DP25 149 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 KRT2P35908 639 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 SCRN3Q0VDG4 424 aa9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 MVPQ14764 893 aaKnown RBP9.59□□□□□ -0.87
CTDSPL-201ENST00000273179 CASP8Q14790 479 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms