RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 PABPC4Q13310 644 aaKnown RBP eCLIP18.52■□□□□ 0.55
RTN1-201ENST00000267484 RNF187Q5TA31 235 aaPredicted RBP18.52■□□□□ 0.55
RTN1-201ENST00000267484 PPP4R3AQ6IN85 833 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 ZNF473Q8WTR7 871 aaKnown RBP18.52■□□□□ 0.55
RTN1-201ENST00000267484 CUL5Q93034 780 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 CEP63Q96MT8 703 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 LRRC27Q9C0I9 530 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 NUCKS1Q9H1E3 243 aaKnown RBP18.52■□□□□ 0.55
RTN1-201ENST00000267484 AIPL1Q9NZN9 384 aa18.52■□□□□ 0.55
RTN1-201ENST00000267484 SBF2Q86WG5 1849 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 E7EVH7 732 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 PPP1R37O75864 691 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 KIF4AO95239 1232 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 SMARCA1P28370 1054 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 TNNC1P63316 161 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 UAP1Q16222 522 aaPredicted RBP18.51■□□□□ 0.55
RTN1-201ENST00000267484 OTUD6BQ8N6M0 293 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 MXD3Q9BW11 206 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 EPN3Q9H201 632 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 PTGISQ16647 500 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 ASPRV1Q53RT3 343 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 TAF1DQ9H5J8 278 aaPredicted RBP18.51■□□□□ 0.55
RTN1-201ENST00000267484 MYH7BA7E2Y1 1941 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 UCHL3P15374 230 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 TMOD1P28289 359 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 SLC30A10Q6XR72 485 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 CCT8L2Q96SF2 557 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 CELF4Q9BZC1 486 aaKnown RBP18.51■□□□□ 0.55
RTN1-201ENST00000267484 AMACRQ9UHK6 382 aa18.51■□□□□ 0.55
RTN1-201ENST00000267484 MYH4Q9Y623 1939 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 CETN3O15182 167 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 MDH1P40925 334 aaKnown RBP18.5■□□□□ 0.55
RTN1-201ENST00000267484 CASP4P49662 377 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 CLK2P49760 499 aaKnown RBP18.5■□□□□ 0.55
RTN1-201ENST00000267484 KCNA1Q09470 495 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 ITGB3BPQ13352 177 aaPredicted RBP18.5■□□□□ 0.55
RTN1-201ENST00000267484 METTL13Q8N6R0 699 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 DAGLAQ9Y4D2 1042 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 CDK5RAP2Q96SN8 1893 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 RSPH10B2B2RC85 870 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 H0YHG0 523 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 CLIC2O15247 247 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 SART1O43290 800 aaKnown RBP18.5■□□□□ 0.55
RTN1-201ENST00000267484 KIAA0754O94854 1291 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 RSPH10BP0C881 870 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 MYBP10242 640 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 ALKBH5Q6P6C2 394 aaKnown RBP18.5■□□□□ 0.55
RTN1-201ENST00000267484 TRIM31Q9BZY9 425 aa18.5■□□□□ 0.55
RTN1-201ENST00000267484 FAM196BA6NMK8 535 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 NT5C2P49902 561 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 GTF2IP78347 998 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 IFT88Q13099 833 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
RTN1-201ENST00000267484 NLRP14Q86W24 1093 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 SFR1Q86XK3 245 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 MREGQ8N565 214 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 CNBD1Q8NA66 436 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 MYCBPAPQ8TBZ2 947 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 WHAMMQ8TF30 809 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 UBLCP1Q8WVY7 318 aaPredicted RBP18.49■□□□□ 0.55
RTN1-201ENST00000267484 NAGPAQ9UK23 515 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 TMEM59LQ9UK28 342 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 CCNL1Q9UK58 526 aaPredicted RBP18.49■□□□□ 0.55
RTN1-201ENST00000267484 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 HOXD13P35453 343 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 NOC2LQ9Y3T9 749 aaKnown RBP18.49■□□□□ 0.55
RTN1-201ENST00000267484 SFI1A8K8P3 1242 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 DCDC2CA8MYV0 355 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 DAPK3O43293 454 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 PON1P27169 355 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 MNAT1P51948 309 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 CYP4A11Q02928 519 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 SF3A3Q12874 501 aaKnown RBP eCLIP18.49■□□□□ 0.55
RTN1-201ENST00000267484 DPY19L2P1Q6NXN4 242 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 DPH5Q9H2P9 285 aa18.49■□□□□ 0.55
RTN1-201ENST00000267484 MEFVO15553 781 aaPredicted RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 AKAP3O75969 853 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 GUCY2CP25092 1073 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 CTNNA1P35221 906 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 COPB2P35606 906 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 HSPA9P38646 679 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 NOVP48745 357 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 USP11P51784 963 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 MRPL12P52815 198 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 B4GALNT4Q76KP1 1039 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 ISCUQ9H1K1 167 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 TMBIM4Q9HC24 238 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 POLLQ9UGP5 575 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 ARMCX3Q9UH62 379 aaPredicted RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 C6orf229H3BNL8 230 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 GNA14O95837 355 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 EXOC3L4Q17RC7 722 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 LRRC57Q8N9N7 239 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 RPGRQ92834 1020 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
RTN1-201ENST00000267484 NT5C3AQ9H0P0 336 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 FBXL5Q9UKA1 691 aa18.48■□□□□ 0.55
RTN1-201ENST00000267484 KRIT1O00522 736 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms