RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 MROH5Q6ZUA9 1318 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TOM1L1O75674 476 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 HIC1Q14526 733 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TMED2Q15363 201 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TRIM16LQ309B1 348 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 WLSQ5T9L3 541 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 OLFML2BQ68BL8 750 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 GPBP1Q86WP2 473 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 SUPT20HQ8NEM7 779 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 MEIS3Q99687 375 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 RWDD2AQ9UIY3 292 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PCDHGB4Q9UN71 923 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PFKFB1P16118 471 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 SLC9A1P19634 815 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PSMC2P35998 433 aaKnown RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 TXKP42681 527 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PLTPP55058 493 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 COPS2P61201 443 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 UGP2Q16851 508 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TBC1D19Q8N5T2 526 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PRRG3Q9BZD7 231 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 CLEC4MQ9H2X3 399 aaPredicted RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 INTUQ9ULD6 942 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 MRPL11Q9Y3B7 192 aaKnown RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 PFKFB2O60825 505 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 CHRNA3P32297 505 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PPP2R2AP63151 447 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 CNBD1Q8NA66 436 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PCYOX1LQ8NBM8 494 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 LRRC2Q9BYS8 371 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 NLRC4Q9NPP4 1024 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 PCDHB15Q9Y5E8 787 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 ZNF197O14709 1029 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 NCF2P19878 526 aaPredicted RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 ABCB4P21439 1286 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 SOX6P35712 828 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TAB1Q15750 504 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 FAM160B1Q5W0V3 765 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 ITPRIPL1Q6GPH6 555 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 FAM45BPQ6NSW5 357 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 ZNF483Q8TF39 744 aaPredicted RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 LARP4BQ92615 738 aaKnown RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 PHF23Q9BUL5 403 aaPredicted RBP5.84□□□□□ -1.47
XRN1-201ENST00000264951 PIGUQ9H490 435 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 SCN3BQ9NY72 215 aa5.84□□□□□ -1.47
XRN1-201ENST00000264951 TK2O00142 265 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 MYCNP04198 464 aaPredicted RBP5.84□□□□□ -1.48
XRN1-201ENST00000264951 PLS1Q14651 629 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 KCTD16Q68DU8 428 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 SARM1Q6SZW1 724 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 TTC8Q8TAM2 541 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 SCFD1Q8WVM8 642 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 BICC1Q9H694 974 aaKnown RBP5.84□□□□□ -1.48
XRN1-201ENST00000264951 PSD3Q9NYI0 1048 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 ZHX2Q9Y6X8 837 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 V9GY48 417 aaPredicted RBP5.84□□□□□ -1.48
XRN1-201ENST00000264951 SPDYE2BA6NHP3 402 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 SPDYE6P0CI01 402 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 ELF1P32519 619 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 FAM69CQ0P6D2 419 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 BYSLQ13895 437 aaKnown RBP5.84□□□□□ -1.48
XRN1-201ENST00000264951 DNAJC24Q6P3W2 148 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 C16orf89Q6UX73 402 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 TBC1D1Q86TI0 1168 aaPredicted RBP5.84□□□□□ -1.48
XRN1-201ENST00000264951 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 NRBP2Q9NSY0 501 aa5.84□□□□□ -1.48
XRN1-201ENST00000264951 AREL1O15033 823 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 AFPP02771 609 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 CALB1P05937 261 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 ATP11CQ8NB49 1132 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 PSMB7Q99436 277 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 YIPF3Q9GZM5 350 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 ASCC2Q9H1I8 757 aaPredicted RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 ZNF556Q9HAH1 456 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 DMRT2Q9Y5R5 561 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 SBNO1A3KN83 1393 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 PNMA8CA0A1B0GUJ8 204 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 TLR3O15455 904 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 KLHL2O95198 593 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 KRT19P08727 400 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 CLCN6P51797 869 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 ADKP55263 362 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 DHX34Q14147 1143 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 BLIDQ8IZY5 108 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 KIAA1586Q9HCI6 787 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 URB2Q14146 1524 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 H0YC42 278 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 KRT72Q14CN4 511 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 HP1BP3Q5SSJ5 553 aaPredicted RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 ARL6IP4Q66PJ3 421 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 CCDC80Q76M96 950 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 EPM2AIP1Q7L775 607 aaPredicted RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 POLKQ9UBT6 870 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 ABCB1P08183 1280 aaPredicted RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 GPATCH4Q5T3I0 446 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 TRMT1LQ7Z2T5 733 aaKnown RBP5.83□□□□□ -1.48
XRN1-201ENST00000264951 SNX19Q92543 992 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 CYTH2Q99418 400 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 TINF2Q9BSI4 451 aa5.83□□□□□ -1.48
XRN1-201ENST00000264951 ETNK1Q9HBU6 452 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms