RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 IGKV6D-21A0A0A0MT36 114 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
USE1-201ENST00000263897 RRN3P2A6NIE6 340 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 IPO5O00410 1097 aaKnown RBP18.28■□□□□ 0.52
USE1-201ENST00000263897 CCNE2O96020 404 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 CTSHP09668 335 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 INSRRP14616 1297 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 CIITAP33076 1130 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 NLRP5P59047 1200 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 TAF2Q6P1X5 1199 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 CPLX2Q6PUV4 134 aaKnown RBP18.28■□□□□ 0.52
USE1-201ENST00000263897 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 TNPO1Q92973 898 aaKnown RBP18.28■□□□□ 0.52
USE1-201ENST00000263897 OSBPL7Q9BZF2 842 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 TUBE1Q9UJT0 475 aa18.28■□□□□ 0.52
USE1-201ENST00000263897 PTPRSQ13332 1948 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 TLL1O43897 1013 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 DEXIO95424 95 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 ADGRE1Q14246 886 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 PLCB4Q15147 1175 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 ABHD15Q6UXT9 468 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 TMCO2Q7Z6W1 182 aaPredicted RBP18.27■□□□□ 0.52
USE1-201ENST00000263897 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
USE1-201ENST00000263897 SEPT8Q92599 483 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 ZNF577Q9BSK1 485 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 ZBED2Q9BTP6 218 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 TBC1D22BQ9NU19 505 aa18.27■□□□□ 0.52
USE1-201ENST00000263897 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
USE1-201ENST00000263897 EDIL3O43854 480 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 GJB5O95377 273 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 CHRNA1P02708 482 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 SLC26A2P50443 739 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 USP11P51784 963 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 IGBP1P78318 339 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 TAP1Q03518 808 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
USE1-201ENST00000263897 PRR16Q569H4 304 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.26■□□□□ 0.51
USE1-201ENST00000263897 RSPH3Q86UC2 560 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 IL17RAQ96F46 866 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 PCDHA4Q9UN74 947 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 TRPC6Q9Y210 931 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
USE1-201ENST00000263897 POTEB3A0JP26 581 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 EIF5BO60841 1220 aaKnown RBP18.25■□□□□ 0.51
USE1-201ENST00000263897 ARHGEF15O94989 841 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 IGFBP4P22692 258 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 SETQ01105 290 aaPredicted RBP18.25■□□□□ 0.51
USE1-201ENST00000263897 SCRN1Q12765 414 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 POTEBQ6S5H4 581 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 FAM177A1Q8N128 213 aaPredicted RBP18.25■□□□□ 0.51
USE1-201ENST00000263897 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 RAD9AQ99638 391 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
USE1-201ENST00000263897 TPCN1Q9ULQ1 816 aa18.25■□□□□ 0.51
USE1-201ENST00000263897 MICAL3Q7RTP6 2002 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 BACH1O14867 736 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 PFKFB2O60825 505 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 AMHP03971 560 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 RPLP2P05387 115 aaKnown RBP18.24■□□□□ 0.51
USE1-201ENST00000263897 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 FAM160B1Q5W0V3 765 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 ZNF746Q6NUN9 644 aaPredicted RBP18.24■□□□□ 0.51
USE1-201ENST00000263897 SWSAP1Q6NVH7 229 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 MIS18BP1Q6P0N0 1132 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 BLIDQ8IZY5 108 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 LENG9Q96B70 501 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 AIFM3Q96NN9 605 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 C22orf23Q9BZE7 217 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 CERS4Q9HA82 394 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 ZNF302Q9NR11 478 aa18.24■□□□□ 0.51
USE1-201ENST00000263897 CDH23Q9H251 3354 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 LCHNA4D1U4 455 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 M0R2N6 131 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 DLL1O00548 723 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 HBP1O60381 514 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 CDKL5O76039 1030 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 AK2P54819 239 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 MGAT3Q09327 533 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 NPY5RQ15761 445 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 FAM117BQ6P1L5 589 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 CCDC60Q8IWA6 550 aaPredicted RBP18.23■□□□□ 0.51
USE1-201ENST00000263897 USP38Q8NB14 1042 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 DAGLBQ8NCG7 672 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 TBCKQ8TEA7 893 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 TRAPPC12Q8WVT3 735 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 APBB2Q92870 758 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 PCDHA2Q9Y5H9 948 aa18.23■□□□□ 0.51
USE1-201ENST00000263897 MYH9P35579 1960 aaKnown RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 A0A0C4DFX4 3053 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 RFXAPO00287 272 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 MSH4O15457 936 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 SEC24BO95487 1268 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
USE1-201ENST00000263897 ATP4AP20648 1035 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 KRT76Q01546 638 aa18.22■□□□□ 0.51
USE1-201ENST00000263897 PDXDC2PQ6P474 469 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms