RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 BAZ2BQ9UIF8 2168 aaKnown RBP13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 SMCO2A6NFE2 343 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 TXKP42681 527 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 NPEPPSP55786 919 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 SPRED3Q2MJR0 410 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM133AQ8N9E0 248 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 DDX12PQ92771 950 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 NSUN4Q96CB9 384 aaKnown RBP13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 PGM2Q96G03 612 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 NAP1L3Q99457 506 aaPredicted RBP13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 AP1M1Q9BXS5 423 aa13.52□□□□□ -0.25
CHMP2B-201ENST00000263780 PALM3A6NDB9 673 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 RTN2O75298 545 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 ARID5AQ03989 594 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 PIGWQ7Z7B1 504 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 METTL13Q8N6R0 699 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 PNMA5Q96PV4 448 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 FMO2Q99518 471 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 MOV10L1Q9BXT6 1211 aaKnown RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 PACSIN1Q9BY11 444 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 DDX47Q9H0S4 455 aaKnown RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 NEUROG2Q9H2A3 272 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 TTC7AQ9ULT0 858 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 CICQ96RK0 1608 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 NUDT17P0C025 328 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 IBSPP21815 317 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 SMARCA1P28370 1054 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 TPCN2Q8NHX9 752 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 TBCKQ8TEA7 893 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 MTMR9Q96QG7 549 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 MKNK2Q9HBH9 465 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 SEC63Q9UGP8 760 aaKnown RBP13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 CACNA1SQ13698 1873 aa13.51□□□□□ -0.25
CHMP2B-201ENST00000263780 MMEP08473 750 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM26FQ5R3K3 315 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 ALKBH5Q6P6C2 394 aaKnown RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 SLFN11Q7Z7L1 901 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 SPAG5Q96R06 1193 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 GANQ9H2C0 597 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 CCDC134Q9H6E4 229 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 MCM9Q9NXL9 1143 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 AMACRQ9UHK6 382 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 COL5A2P05997 1499 aaPredicted RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 ESYT2A0FGR8 921 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 CYTH3O43739 400 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 GBP1P32455 592 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 MECOMQ03112 1051 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 C6orf118Q5T5N4 469 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 CCDC65Q8IXS2 484 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 IL17RBQ9NRM6 502 aa13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 NOP53Q9NZM5 478 aaKnown RBP13.5□□□□□ -0.25
CHMP2B-201ENST00000263780 NUP98P52948 1817 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 FAM187AA6NFU0 413 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 hCG_1984214I3L0E3 225 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 RPSAP08865 295 aaKnown RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 H2AFZP0C0S5 128 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 CYP2D6P10635 497 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PAX7P23759 505 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 FLT3P36888 993 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 MMP13P45452 471 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 EVA1CP58658 441 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 COASYQ13057 564 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PPP2R5AQ15172 486 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 LRRC41Q15345 812 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TMEM119Q4V9L6 283 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 H2AFVQ71UI9 128 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF444Q8N0Y2 327 aaPredicted RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 REXO1Q8N1G1 1221 aaKnown RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ZNF713Q8N859 430 aaPredicted RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PLCD4Q9BRC7 762 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 NAGPAQ9UK23 515 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 MYH1P12882 1939 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 OPLAHO14841 1288 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 CETN3O15182 167 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 TTI1O43156 1089 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 GFPT2O94808 682 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 AGTP01019 485 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 CHN1P15882 459 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PRKCIP41743 596 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 PTK2Q05397 1052 aa13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 ENOX2Q16206 610 aaKnown RBP13.49□□□□□ -0.25
CHMP2B-201ENST00000263780 DENND2CQ68D51 928 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms