RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 MIPOL1Q8TD10 442 aa18.21■□□□□ 0.51
CROCCP3-201ENST00000263511 GCNAQ96QF7 691 aa18.21■□□□□ 0.51
CROCCP3-201ENST00000263511 BAIAP2L1Q9UHR4 511 aa18.21■□□□□ 0.51
CROCCP3-201ENST00000263511 ARHGAP31Q2M1Z3 1444 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 PHLPP2Q6ZVD8 1323 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 NFX1Q12986 1120 aaKnown RBP18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 DBN1Q16643 649 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SIRT2Q8IXJ6 389 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 MCUQ8NE86 351 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 TMEM47Q9BQJ4 181 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 MYL3P08590 195 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 IL9RQ01113 521 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SAMSN1Q9NSI8 373 aaKnown RBP18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8QA0A0J9YX86 632 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8OA6NCC3 632 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8NF8WBI6 632 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 CYP2D6P10635 497 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 PBKQ96KB5 322 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 ATP6V0A4Q9HBG4 840 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 UBN2Q6ZU65 1347 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8IPA6NC78 632 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8JA6NMD2 632 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 DYNLT1P63172 113 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SNX1Q13596 522 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SCARA5Q6ZMJ2 495 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SPATS2Q86XZ4 545 aaKnown RBP18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 TBC1D22BQ9NU19 505 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 SLC8A2Q9UPR5 921 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 OVOS2A0A0G2JMS6 1433 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 OVOS2A0A0J9YW53 1432 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 OVOS2Q6IE36 1432 aa18.2■□□□□ 0.5
CROCCP3-201ENST00000263511 UTYO14607 1347 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 LRRD1A4D1F6 860 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 CYP2E1P05181 493 aaPredicted RBP18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 EIF4A3P38919 411 aaKnown RBP18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 ARL13BQ3SXY8 428 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 ATP6V1E2Q96A05 226 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 WDR64B1ANS9 1081 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 MMEL1Q495T6 779 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 EPHA10Q5JZY3 1008 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 TRIM42Q8IWZ5 723 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 CEP120Q8N960 986 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 NCAPGQ9BPX3 1015 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 THOC5Q13769 683 aaKnown RBP18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 ZNF667Q5HYK9 610 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 TBC1D9BQ66K14 1250 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 RCSD1Q6JBY9 416 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 NSUN6Q8TEA1 469 aaKnown RBP18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 PRDM15P57071 1507 aaPredicted RBP18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 SHROOM2Q13796 1616 aa18.19■□□□□ 0.5
CROCCP3-201ENST00000263511 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 KPNA2P52292 529 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 BASP1P80723 227 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 IQCB1Q15051 598 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 PARD3BQ8TEW8 1205 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 LARGE1O95461 756 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 ZSCAN26Q16670 478 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 PFKFB3Q16875 520 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 PPP1R18Q6NYC8 613 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 APOBEC3FQ8IUX4 373 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 TOPORSQ9NS56 1045 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 TTC36A6NLP5 189 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 USP17L10C9JJH3 530 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 PRELPP51888 382 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8FQ08AF8 430 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 GOLGA8DPQ0D2H9 430 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 MYLK4Q86YV6 388 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 NHEJ1Q9H9Q4 299 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 RAVER2Q9HCJ3 691 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 MSH2P43246 934 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 PLTPP55058 493 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 DMTNQ08495 405 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 DCLK2Q8N568 766 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 OR6B3Q8NGW1 331 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 ARHGEF1Q92888 912 aaKnown RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 EPHB4P54760 987 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 KRT76Q01546 638 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 TNFAIP2Q03169 654 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 HAUS8Q9BT25 410 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 KIAA1586Q9HCI6 787 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 NRBP1Q9UHY1 535 aa18.18■□□□□ 0.5
CROCCP3-201ENST00000263511 MROH7-TTC4A0A0A0MT08 1334 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 SART1O43290 800 aaKnown RBP18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 ERICH1Q86X53 443 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 EPB41L5Q9HCM4 733 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 INTS9Q9NV88 658 aaKnown RBP18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 SCINQ9Y6U3 715 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 ABCB11O95342 1321 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 CSPG5O95196 566 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 EPHB1P54762 984 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 STX1BP61266 288 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 MAPK6Q16659 721 aa18.17■□□□□ 0.5
CROCCP3-201ENST00000263511 HVCN1Q96D96 273 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms