RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 LINC00301Q8NCQ3 95 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 ORAI2Q96SN7 254 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 HINFPQ9BQA5 517 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 UBN1Q9NPG3 1134 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 RCOR1Q9UKL0 485 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 IQGAP3Q86VI3 1631 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 SEC31AO94979 1220 aaKnown RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 KIF22Q14807 665 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 NBPF9Q3BBW0 867 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 NR1H3Q13133 447 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 TAF11Q15544 211 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 N4BP2L2Q92802 583 aaPredicted RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 GREM2Q9H772 168 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 DBNLQ9UJU6 430 aaKnown RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 TRIM33Q9UPN9 1127 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 NCF2P19878 526 aaPredicted RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 ADD2P35612 726 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 SPARCL1Q14515 664 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 CHMP6Q96FZ7 201 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 ARHGEF9O43307 516 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 ADORA1P30542 326 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 KCTD1Q719H9 257 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 MYH15Q9Y2K3 1946 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 E9PMD0 336 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 GUCY2CP25092 1073 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 PHKA1P46020 1223 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 TSTA3Q13630 321 aaPredicted RBP18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 C16orf87Q6PH81 154 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 FBXL13Q8NEE6 735 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 NBPF3Q9H094 633 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 PCYT1AP49585 367 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 TMC4Q7Z404 712 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 TAB3Q8N5C8 712 aaPredicted RBP18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 KANSL2Q9H9L4 492 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 AATKQ6ZMQ8 1374 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 PLEKHG1Q9ULL1 1385 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 CCDC188H7C350 402 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 HP1BP3Q5SSJ5 553 aaPredicted RBP18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 DPY19L2Q6NUT2 758 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 MCUQ8NE86 351 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 INO80BQ9C086 356 aaPredicted RBP18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 EIF4A3P38919 411 aaKnown RBP18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 USP14P54578 494 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 SULF1Q8IWU6 871 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 PROM2Q8N271 834 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 CCDC24Q8N4L8 307 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 SH3GLB2Q9NR46 395 aa18.78■□□□□ 0.6
NOTCH3-201ENST00000263388 ANKARQ7Z5J8 1434 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 TCP10L2B9ZVM9 353 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 ZCCHC11Q5TAX3 1644 aaKnown RBP18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CUL4AQ13619 759 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 DCPSQ96C86 337 aaKnown RBP18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CEP170Q5SW79 1584 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 SORBS3O60504 671 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CLCN6P51797 869 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 DYNLT1P63172 113 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CCNA1P78396 465 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 CAV1Q03135 178 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 IL17REQ8NFR9 667 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 MRPL40Q9NQ50 206 aaKnown RBP18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 MXI1P50539 228 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 IGBP1P78318 339 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 GRAMD4Q6IC98 578 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 YY1AP1Q9H869 796 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
NOTCH3-201ENST00000263388 SLC7A5Q01650 507 aa18.77■□□□□ 0.59
NOTCH3-201ENST00000263388 E2F5Q15329 346 aa18.77■□□□□ 0.59
NOTCH3-201ENST00000263388 ACRBPQ8NEB7 543 aa18.77■□□□□ 0.59
NOTCH3-201ENST00000263388 SLC12A1Q13621 1099 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 FAM149B1Q96BN6 582 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 SPDYE2BA6NHP3 402 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 TRPA1O75762 1119 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 SPDYE6P0CI01 402 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 EAPPQ56P03 285 aaPredicted RBP18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 SPOPLQ6IQ16 392 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 TEX12Q9BXU0 123 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 NFKBIAP25963 317 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 OCRLQ01968 901 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 RPAP1Q9BWH6 1393 aaPredicted RBP18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 SH2B2O14492 632 aaPredicted RBP18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 MYLK4Q86YV6 388 aaPredicted RBP18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 CNKSR1Q969H4 720 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 ACSL3O95573 720 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 CIITAP33076 1130 aa18.76■□□□□ 0.59
NOTCH3-201ENST00000263388 FTCDO95954 541 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 CYP21A2P08686 494 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 PLA2G4BP0C869 781 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 CEP170P1Q96L14 293 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 DDIT3P35638 169 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 KLC2Q9H0B6 622 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 NDST4Q9H3R1 872 aa18.75■□□□□ 0.59
NOTCH3-201ENST00000263388 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms