RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 LRRC27Q9C0I9 530 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 DNAJC25Q9H1X3 360 aa25.34■■□□□ 1.65
UFD1-201ENST00000263202 FARP2O94887 1054 aaPredicted RBP25.33■■□□□ 1.65
UFD1-201ENST00000263202 EYA4O95677 639 aa25.33■■□□□ 1.65
UFD1-201ENST00000263202 RPN1P04843 607 aaKnown RBP25.33■■□□□ 1.65
UFD1-201ENST00000263202 BMP6P22004 513 aa25.33■■□□□ 1.65
UFD1-201ENST00000263202 QARSP47897 775 aaKnown RBP25.33■■□□□ 1.65
UFD1-201ENST00000263202 DPCR1Q3MIW9 517 aa25.33■■□□□ 1.65
UFD1-201ENST00000263202 ZSWIM4Q9H7M6 989 aa25.33■■□□□ 1.65
UFD1-201ENST00000263202 RNF186Q9NXI6 227 aa25.33■■□□□ 1.65
UFD1-201ENST00000263202 KLRC4O43908 158 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 GGPS1O95749 300 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 RGS2P41220 211 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 FCGRTP55899 365 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 SP4Q02446 784 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 CNNM4Q6P4Q7 775 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 ABHD15Q6UXT9 468 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 C11orf57Q6ZUT1 292 aaPredicted RBP25.33■■□□□ 1.64
UFD1-201ENST00000263202 SYT2Q8N9I0 419 aaPredicted RBP25.33■■□□□ 1.64
UFD1-201ENST00000263202 PIGOQ8TEQ8 1089 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 SCFD2Q8WU76 684 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 NACC1Q96RE7 527 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 ARHGAP39Q9C0H5 1083 aa25.33■■□□□ 1.64
UFD1-201ENST00000263202 MYH9P35579 1960 aaKnown RBP25.32■■□□□ 1.64
UFD1-201ENST00000263202 RBM47A0AV96 593 aaKnown RBP25.32■■□□□ 1.64
UFD1-201ENST00000263202 ATG7O95352 703 aa25.32■■□□□ 1.64
UFD1-201ENST00000263202 SSBP05455 408 aaKnown RBP eCLIP25.32■■□□□ 1.64
UFD1-201ENST00000263202 TTLL4Q14679 1199 aa25.32■■□□□ 1.64
UFD1-201ENST00000263202 UGCGQ16739 394 aa25.32■■□□□ 1.64
UFD1-201ENST00000263202 ZBTB39O15060 712 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 TRPA1O75762 1119 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 LYPLA2O95372 231 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 PSAPP07602 524 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 TXNP10599 105 aaKnown RBP25.31■■□□□ 1.64
UFD1-201ENST00000263202 PSMC4P43686 418 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 PSMC5P62195 406 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 METTL7BQ6UX53 244 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 TRIM47Q96LD4 638 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 BHMT2Q9H2M3 363 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 FLRT1Q9NZU1 646 aa25.31■■□□□ 1.64
UFD1-201ENST00000263202 CYP11B2P19099 503 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 CYP2B6P20813 491 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 CELF3Q5SZQ8 465 aaKnown RBP25.3■■□□□ 1.64
UFD1-201ENST00000263202 MIS18BP1Q6P0N0 1132 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 RNF214Q8ND24 703 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 DDX12PQ92771 950 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 APBA2Q99767 749 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 ABHD16BQ9H3Z7 469 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 SUPT20HL2P0C7V6 817 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 ASIC1P78348 528 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 KCNB1Q14721 858 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 TMEM63BQ5T3F8 832 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 DYMQ7RTS9 669 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 GPBP1Q86WP2 473 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 C4orf19Q8IY42 314 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 MLXIPQ9HAP2 919 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 RMND1Q9NWS8 449 aa25.3■■□□□ 1.64
UFD1-201ENST00000263202 CAVIN2O95810 425 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 SP3Q02447 781 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 CCL14Q16627 93 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 KMT5BQ4FZB7 885 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 ARSHQ5FYA8 562 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 SWSAP1Q6NVH7 229 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 DNAJC19Q96DA6 116 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 GRPEL1Q9HAV7 217 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 GABBR1Q9UBS5 961 aa25.29■■□□□ 1.64
UFD1-201ENST00000263202 GSTTP1A0A1W2PQM5 241 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 ZNF165P49910 485 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 ACVR2BQ13705 512 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 OLFML2BQ68BL8 750 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 CCDC60Q8IWA6 550 aaPredicted RBP25.28■■□□□ 1.64
UFD1-201ENST00000263202 FAM200AQ8TCP9 573 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 COPS5Q92905 334 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 ARID2Q68CP9 1835 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 DHX37Q8IY37 1157 aaKnown RBP25.28■■□□□ 1.64
UFD1-201ENST00000263202 CBX8Q9HC52 389 aa25.28■■□□□ 1.64
UFD1-201ENST00000263202 IGKV6D-21A0A0A0MT36 114 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 PVALEFA0A1B0GWK0 134 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 RHOBTB3O94955 611 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 IGHA2P01877 340 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 ADCYAP1R1P41586 468 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 UNC13DQ70J99 1090 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 ATP6V0A1Q93050 837 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 BMP2KQ9NSY1 1161 aaPredicted RBP25.27■■□□□ 1.64
UFD1-201ENST00000263202 DBR1Q9UK59 544 aaKnown RBP25.27■■□□□ 1.64
UFD1-201ENST00000263202 CASP8AP2Q9UKL3 1982 aa25.27■■□□□ 1.64
UFD1-201ENST00000263202 IGSF9BQ9UPX0 1349 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 ZNF862O60290 1169 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 XRCC6P12956 609 aaKnown RBP eCLIP25.26■■□□□ 1.631e-14■■□□□ 12.5
UFD1-201ENST00000263202 YWHABP31946 246 aaKnown RBP25.26■■□□□ 1.63
UFD1-201ENST00000263202 CAP1Q01518 475 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 MLKLQ8NB16 471 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 SEPT1Q8WYJ6 367 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 NAT10Q9H0A0 1025 aaKnown RBP25.26■■□□□ 1.63
UFD1-201ENST00000263202 GABRQQ9UN88 632 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 NPHP3-ACAD11A0A0J9YXS1 232 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 DKC1O60832 514 aaKnown RBP eCLIP25.26■■□□□ 1.63
UFD1-201ENST00000263202 HSDL1Q3SXM5 330 aa25.26■■□□□ 1.63
UFD1-201ENST00000263202 ZNF658Q5TYW1 1059 aaPredicted RBP25.26■■□□□ 1.63
UFD1-201ENST00000263202 RINT1Q6NUQ1 792 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms